- t -

t : denoptim.graph.rings.RingClosure
t1 : denoptim.graph.rings.RingClosure
t2 : denoptim.graph.rings.RingClosure
tabbedPane : denoptim.gui.CompatibilityMatrixForm, denoptim.gui.GUIPrepare
tabCustomVars : denoptim.gui.FitnessParametersForm
tabCustomVarsMod : denoptim.gui.FitnessParametersForm
tabFieldChange : denoptim.gui.ParametersForm
tableCapping : denoptim.gui.CompatibilityMatrixForm
tableFrbEnd : denoptim.gui.CompatibilityMatrixForm
tabModCapping : denoptim.gui.CompatibilityMatrixForm
tabModFrbEnd : denoptim.gui.CompatibilityMatrixForm
tabModPar11 : denoptim.gui.FSParametersForm
tabModPar21 : denoptim.gui.FSParametersForm
tabModPar22 : denoptim.gui.FSParametersForm
tabModPropTags : denoptim.gui.GUIPreferencesDialog
tabPanel : denoptim.gui.FragmentViewPanel, denoptim.gui.MoleculeViewPanel, denoptim.gui.VertexAsGraphViewPanel, denoptim.gui.VertexAsTwoDimStructureViewPanel
tabPar11 : denoptim.gui.FSParametersForm
tabPar21 : denoptim.gui.FSParametersForm
tabPar22 : denoptim.gui.FSParametersForm
tabPropTags : denoptim.gui.GUIPreferencesDialog
TANH : denoptim.gui.GAParametersForm.ProbabilityFuncitonShape
targetFragments : denoptim.programs.fragmenter.FragmenterParameters
targetFragmentsFile : denoptim.programs.fragmenter.FragmenterParameters
task : denoptim.utils.GraphEdit
taskCounter : denoptim.utils.TaskUtils
taskID : denoptim.programs.moldecularmodelbuilder.MMBuilderParameters
taskList : denoptim.task.TasksBatchManager
taskName : denoptim.integration.tinker.TinkerException
tb3d : denoptim.combinatorial.GraphBuildingTask
tbm : denoptim.ga.EvolutionaryAlgorithm
tempDir : denoptim.fitness.FitnessExpressionParserTest, denoptim.fitness.FitnessProviderTest, denoptim.fragmenter.ParallelFragmentationAlgorithmTest, denoptim.fragspace.FragmentSpaceTest, denoptim.ga.EAUtilsTest, denoptim.graph.TemplateTest, denoptim.io.DenoptimIOTest, denoptim.main.MainTest, denoptim.programs.denovo.GAParametersTest, denoptim.utils.SizeControlledSetTest
Template : denoptim.graph.Vertex.VertexType
templateJacket : denoptim.graph.DGraph
templateURL : denoptim.gui.CuttingRulesSelectionDialog.SMARTSVisualizationButton
testFitnessTabUID : denoptim.gui.GUIPrepareFitnessRunner
texReaderTabUID : denoptim.gui.GUITextReader
thrownByTask : denoptim.combinatorial.CombinatorialExplorerByLayer, denoptim.task.ParallelAsynchronousTaskExecutor
thrownExc : denoptim.task.Task
timeout : denoptim.graph.FragmentIsomorphismInspector
timeStamp : denoptim.programs.denovo.GAParameters
TINKER_MAP : denoptim.programs.moldecularmodelbuilder.MMBuilderParameters
titlePanel : denoptim.gui.VertexViewPanel
tmol : denoptim.molecularmodeling.ChemicalObjectModel
TMPFRAGFILEFORMAT : denoptim.constants.DENOPTIMConstants
TMPLVIEWERCARDNAME : denoptim.gui.GraphVertexMolViewerPanel
tmpSDFFile : denoptim.gui.FragmentViewPanel, denoptim.gui.MoleculeViewPanel
tmpSpace : denoptim.gui.GUIPreferences
toAp : denoptim.gui.GraphViewerPanel.JEdge
toleratePartialData : denoptim.gui.MoleculeViewPanel
toolBar : denoptim.gui.GUIMainPanel
toolINTXYZ : denoptim.programs.moldecularmodelbuilder.MMBuilderParameters
toolPSSROT : denoptim.programs.moldecularmodelbuilder.MMBuilderParameters
toolXYZINT : denoptim.programs.moldecularmodelbuilder.MMBuilderParameters
topoMat : denoptim.graph.rings.RingSizeManager
totalGraphsLabel : denoptim.gui.GUIGraphHandler
totalVerticesLabel : denoptim.gui.GUIVertexSelector
totalVrtxsLabel : denoptim.gui.GUIVertexInspector
totCandsPerAP : denoptim.fragspace.FragsCombinationIterator
totCombs : denoptim.fragspace.FragsCombinationIterator
totSubmittedTasks : denoptim.combinatorial.CombinatorialExplorerByLayer
tp1 : denoptim.utils.MathUtils
tp2 : denoptim.utils.MathUtils
tp3 : denoptim.utils.MathUtils
tp4 : denoptim.utils.MathUtils
tpe : denoptim.combinatorial.CombinatorialExplorerByLayer, denoptim.ga.EvolutionaryAlgorithm, denoptim.programs.fitnessevaluator.FPRunner, denoptim.task.ParallelAsynchronousTaskExecutor, denoptim.task.StaticTaskManager
translateX : denoptim.gui.VertexAsTwoDimStructureViewPanel.TwoDimStructurePanel
translateY : denoptim.gui.VertexAsTwoDimStructureViewPanel.TwoDimStructurePanel
trgAP : denoptim.graph.Edge
trgAPC : denoptim.graph.EdgeQuery, denoptim.gui.GraphViewerPanel.JEdge
trgAPClass : denoptim.gui.CompatibilityMatrixForm.TargetAPClassToken
trgAPClLabel : denoptim.gui.CompatibilityMatrixForm.TargetAPClassToken
trgAPID : denoptim.graph.EdgeQuery, denoptim.gui.GraphViewerPanel.JEdge
trgClassesPanel : denoptim.gui.CompatibilityMatrixForm.CompatibilityRuleLine
trgClassesScroller : denoptim.gui.CompatibilityMatrixForm.CompatibilityRuleLine
trgDelListener : denoptim.gui.CompatibilityMatrixForm.CompatibilityRuleLine
trgVertexId : denoptim.graph.EdgeQuery
TRIPLE : denoptim.graph.Edge.BondType
tuningPoint : denoptim.graph.rings.ClosableChain
turningPointVert : denoptim.graph.rings.PathSubGraph
twoDimView : denoptim.gui.VertexAsTwoDimStructureViewPanel
twoDimViewer : denoptim.gui.VertexViewPanel
TWODVIEWERCARDNAME : denoptim.gui.VertexViewPanel
TXT : denoptim.files.FileFormat
txtAPCName : denoptim.gui.GUIAPClassDefinitionDialog
txtChartPointSize : denoptim.gui.GUIPreferencesDialog
txtCPMat : denoptim.gui.FSParametersForm
txtEq : denoptim.gui.FitnessParametersForm
txtFitProviderInterpreter : denoptim.gui.FitnessParametersForm
txtFitProviderSource : denoptim.gui.FitnessParametersForm
txtFPSource : denoptim.gui.FitnessParametersForm
txtFrgMols : denoptim.gui.GAParametersForm
txtFSESource : denoptim.gui.FSEParametersForm
txtFSSource : denoptim.gui.FSParametersForm
txtGASource : denoptim.gui.GAParametersForm
txtGraphNodeSize : denoptim.gui.GUIPreferencesDialog
txtGraphTxtSize : denoptim.gui.GUIPreferencesDialog
txtInFile : denoptim.gui.GUIPrepareFitnessRunner.InputForm
txtLinearity : denoptim.gui.CuttingRulesSelectionDialog
txtMolToGraph : denoptim.gui.GAParametersForm
txtOutFile : denoptim.gui.GUIPrepareFitnessRunner.InputForm
txtPane : denoptim.gui.GUITextReader
txtPar1 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar10 : denoptim.gui.GAParametersForm
txtPar11 : denoptim.gui.FSEParametersForm
txtPar12 : denoptim.gui.FSEParametersForm
txtPar15 : denoptim.gui.FSParametersForm
txtPar16 : denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar17 : denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar18 : denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar2 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm
txtPar20 : denoptim.gui.GAParametersForm
txtPar21 : denoptim.gui.GAParametersForm
txtPar22 : denoptim.gui.GAParametersForm
txtPar23 : denoptim.gui.FSParametersForm
txtPar24 : denoptim.gui.GAParametersForm
txtPar25 : denoptim.gui.FSParametersForm
txtPar26 : denoptim.gui.FSParametersForm
txtPar27 : denoptim.gui.FSParametersForm
txtPar3 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar30 : denoptim.gui.FSParametersForm
txtPar31 : denoptim.gui.FSParametersForm
txtPar32 : denoptim.gui.FSParametersForm
txtPar33 : denoptim.gui.FSParametersForm
txtPar34 : denoptim.gui.FSParametersForm
txtPar4 : denoptim.gui.FSEParametersForm
txtPar5 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm
txtPar6 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar7 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar8 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtPar9 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm
txtParMSM : denoptim.gui.GAParametersForm
txtParWC : denoptim.gui.GAParametersForm
txtScaffoldingPolicy : denoptim.gui.MolToGraphParametersDialog
txtSearch : denoptim.gui.CompatibilityMatrixForm
txtTmpSpace : denoptim.gui.GUIPreferencesDialog
txtUnformattedInput : denoptim.gui.ParametersForm
type : denoptim.task.StreamGobbler