A panel that collects three viewers: More...

Inheritance diagram for denoptim.gui.GraphVertexMolViewerPanel:

Collaboration diagram for denoptim.gui.GraphVertexMolViewerPanel:

Classes
class	MouseModeChoiceListener
	Listener for identifying the node on which the user has clicked and load the corresponding fragment into the fragment viewer pane. More...

class	NodeClickedListener
	Listener for identifying the node on which the user has clicked and load the corresponding fragment into the fragment viewer pane. More...

Public Member Functions
	GraphVertexMolViewerPanel ()
	Constructor. More...

void	loadDnGraphToViewer (DGraph dnGraph, IAtomContainer mol, boolean keepSprites)
	Loads the given graph into the graph viewer. More...

void	loadDnGraphToViewer (DGraph dnGraph, boolean keepLabels)
	Loads the given graph into the graph viewer. More...

void	renderMolVieverToNeedUpdate ()
	Triggers the generation of the molecular representation of the loaded graph. More...

IAtomContainer	updateMolevularViewer ()
	Updates the molecular representation of the loaded graph. More...

void	resetFragViewerCardDeck ()
	Changes the appearance of the vertex visualisation panel to an empty card that is consistent with the presence or lack of a loaded fragment space. More...

void	clearCurrentSystem ()
	Clears the current graph viewer but keeps track of the latest graph loaded. More...

void	clearVertexViewer ()
	Clears the molecular viewer and hides it behind the empty card. More...

void	clearMolecularViewer ()
	Clears the molecular viewer and hides it behind the empty card. More...

void	moveDividerLocation ()
	Moved the divider to the location configured by some content-based reasoning. More...

boolean	hasSelectedNodes ()

void	alterLabels (LabelType labelName, boolean show)
	Adds/Removes labels to the graph components that are presently selected. More...

ArrayList< AttachmentPoint >	getAPsSelectedInViewer ()
	Identifies which attachment points are selected in the graph viewer. More...

ArrayList< Vertex >	getSelectedNodesInViewer ()
	Identifies which vertices are selected in the graph viewer. More...

void	bringCardToTopOfVertexViewer (String cardName)
	Allows to show the given card in the vertex viewer panel. More...

void	bringCardToTopOfMolViewer (String cardName)
	Allows to show the given card in the molecular structure viewer. More...

void	dispose ()

void	setMouseMode (ModalGraphMouse.Mode mode)
	Alters the functionality of mouse in the graph visualization panel. More...

Protected Attributes
FragmentViewPanel	fragViewer

MoleculeViewPanel	molViewer

final String	NOFSCARDNAME = "noFSCard"

final String	EMPTYCARDNAME = "emptyCard"

final String	NOTDUABLECARDNAME = "notDoableCard"

final String	UPDATETOVIEW = "updateCard"

final String	MOLVIEWERCARDNAME = "molViewerCard"

final String	FRAGVIEWERCARDNAME = "fragViewerCard"

final String	TMPLVIEWERCARDNAME = "tmplViewwerCard"

GraphViewerPanel	graphViewer

Private Member Functions
void	initialize ()
	Initialize the panel and add buttons. More...

void	removeNestedGraphViewer ()

void	visualizeVertexInNestedViewer (Vertex v)
	Makes a clone of the given vertex and loads that clone into the nested visualization frame. More...

Private Attributes
DGraph	dnGraph
	The unsaved version of the currently loaded graph. More...

JUNGGraphSnapshot	oldGSStatus
	The snapshot of the old (removed) visualized GraphStrem system. More...

JSplitPane	leftPane

JPanel	fragViewerPanel

JPanel	fragViewerHeader

JPanel	fragViewerCardHolder

JPanel	fragViewerEmptyCard

JPanel	fragViewerNotDuableCard

JPanel	fragViewerNoFSCard

GraphVertexMolViewerPanel	fragViewerTmplViewerCard

JPanel	molViewerPanel

JPanel	molViewerHeader

JPanel	molViewerCardHolder

JPanel	molViewerEmptyCard

JPanel	molViewerNeedUpdateCard

final double	DEFDIVLOC = 0.5

double	defDivLoc = DEFDIVLOC

Static Private Attributes
static final long	serialVersionUID = 1L
	Version UID. More...

static final IChemObjectBuilder	builder

Detailed Description

A panel that collects three viewers:

one for Graphs,
one for vertex content,
and one for molecular structures.

Author: Marco Foscato

Definition at line 63 of file GraphVertexMolViewerPanel.java.

Constructor & Destructor Documentation

◆ GraphVertexMolViewerPanel()

denoptim.gui.GraphVertexMolViewerPanel.GraphVertexMolViewerPanel ( )

Constructor.

Definition at line 117 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.initialize().

Referenced by denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

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Member Function Documentation

◆ alterLabels()

void denoptim.gui.GraphVertexMolViewerPanel.alterLabels	(	LabelType	labelName,
		boolean	show
	)

Adds/Removes labels to the graph components that are presently selected.

Parameters

labelName	the string identifying which label to add.
show	use `true` to display labels, or `false` to hide labels of the given kind.

Definition at line 562 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphViewerPanel.alterLabels(), and denoptim.gui.GraphVertexMolViewerPanel.graphViewer.

Referenced by denoptim.gui.GUIGraphHandler.showHideLabelsListener.actionPerformed().

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◆ bringCardToTopOfMolViewer()

void denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfMolViewer ( String cardName )

Allows to show the given card in the molecular structure viewer.

Parameters

cardName the name of the card to display. The possible values are defined as static, final fields: GraphVertexMolViewerPanel.UPDATETOVIEW, GraphVertexMolViewerPanel.MOLVIEWERCARDNAME, GraphVertexMolViewerPanel.TMPLVIEWERCARDNAME

Definition at line 635 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.molViewerCardHolder.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearMolecularViewer(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), denoptim.gui.GUIGraphHandler.removeCurrentDnGraph(), denoptim.gui.GraphVertexMolViewerPanel.renderMolVieverToNeedUpdate(), and denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer().

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◆ bringCardToTopOfVertexViewer()

void denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfVertexViewer ( String cardName )

Allows to show the given card in the vertex viewer panel.

Parameters

cardName the name of the card to display. The possible values are defined as static, final fields: GraphVertexMolViewerPanel.NOFSCARDNAME, GraphVertexMolViewerPanel.EMPTYCARDNAME, GraphVertexMolViewerPanel.NOTDUABLECARDNAME, GraphVertexMolViewerPanel.FRAGVIEWERCARDNAME

Definition at line 619 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.fragViewerCardHolder.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearVertexViewer(), denoptim.gui.GraphVertexMolViewerPanel.resetFragViewerCardDeck(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

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◆ clearCurrentSystem()

void denoptim.gui.GraphVertexMolViewerPanel.clearCurrentSystem ( )

Clears the current graph viewer but keeps track of the latest graph loaded.

Definition at line 395 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphViewerPanel.cleanup(), denoptim.gui.GraphVertexMolViewerPanel.clearMolecularViewer(), denoptim.gui.GraphVertexMolViewerPanel.clearVertexViewer(), denoptim.gui.GraphVertexMolViewerPanel.dnGraph, and denoptim.gui.GraphVertexMolViewerPanel.graphViewer.

Referenced by denoptim.gui.GUIGraphHandler.clearCurrentSystem().

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◆ clearMolecularViewer()

void denoptim.gui.GraphVertexMolViewerPanel.clearMolecularViewer ( )

Clears the molecular viewer and hides it behind the empty card.

Definition at line 421 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfMolViewer(), denoptim.gui.MoleculeViewPanel.clearAll(), denoptim.gui.GraphVertexMolViewerPanel.EMPTYCARDNAME, and denoptim.gui.GraphVertexMolViewerPanel.molViewer.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearCurrentSystem(), and denoptim.gui.GUIGraphHandler.initializeCurrentGraph().

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◆ clearVertexViewer()

void denoptim.gui.GraphVertexMolViewerPanel.clearVertexViewer ( )

Clears the molecular viewer and hides it behind the empty card.

Definition at line 408 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfVertexViewer(), denoptim.gui.FragmentViewPanel.clearAll(), denoptim.gui.GraphVertexMolViewerPanel.EMPTYCARDNAME, and denoptim.gui.GraphVertexMolViewerPanel.fragViewer.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearCurrentSystem().

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◆ dispose()

void denoptim.gui.GraphVertexMolViewerPanel.dispose ( )

Definition at line 647 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.FragmentViewPanel.dispose(), denoptim.gui.GraphVertexMolViewerPanel.dispose(), denoptim.gui.GraphViewerPanel.dispose(), denoptim.gui.MoleculeViewPanel.dispose(), denoptim.gui.GraphVertexMolViewerPanel.fragViewer, denoptim.gui.GraphVertexMolViewerPanel.fragViewerTmplViewerCard, denoptim.gui.GraphVertexMolViewerPanel.graphViewer, and denoptim.gui.GraphVertexMolViewerPanel.molViewer.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.dispose(), denoptim.gui.GUIGraphHandler.dispose(), and denoptim.gui.GraphVertexMolViewerPanel.removeNestedGraphViewer().

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◆ getAPsSelectedInViewer()

ArrayList< AttachmentPoint > denoptim.gui.GraphVertexMolViewerPanel.getAPsSelectedInViewer ( )

Identifies which attachment points are selected in the graph viewer.

Returns: the list selected attachment points.

Definition at line 574 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphViewerPanel.JVertexType.AP, denoptim.gui.GraphViewerPanel.getSelectedNodes(), and denoptim.gui.GraphVertexMolViewerPanel.graphViewer.

Referenced by denoptim.gui.GUIGraphHandler.initialize().

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◆ getSelectedNodesInViewer()

ArrayList< Vertex > denoptim.gui.GraphVertexMolViewerPanel.getSelectedNodesInViewer ( )

Identifies which vertices are selected in the graph viewer.

Returns: the list of identifiers

Definition at line 594 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphViewerPanel.JVertexType.AP, denoptim.gui.GraphViewerPanel.getSelectedNodes(), and denoptim.gui.GraphVertexMolViewerPanel.graphViewer.

Referenced by denoptim.gui.GUIGraphHandler.initialize().

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◆ hasSelectedNodes()

boolean denoptim.gui.GraphVertexMolViewerPanel.hasSelectedNodes ( )

Returns: true is there is any selected node in the graph viewer

Definition at line 549 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.graphViewer, and denoptim.gui.GraphViewerPanel.hasSelected().

Referenced by denoptim.gui.GUIGraphHandler.showHideLabelsListener.actionPerformed().

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◆ initialize()

void denoptim.gui.GraphVertexMolViewerPanel.initialize ( )

private

Initialize the panel and add buttons.

Definition at line 127 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.GraphVertexMolViewerPanel().

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◆ loadDnGraphToViewer() [1/2]

void denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer	(	DGraph	dnGraph,
		boolean	keepLabels
	)

Loads the given graph into the graph viewer.

Parameters

dnGraph	the graph to load.
keepLabels	if `true` we'll keep track of old labels. loaded.

Definition at line 268 of file GraphVertexMolViewerPanel.java.

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◆ loadDnGraphToViewer() [2/2]

void denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer	(	DGraph	dnGraph,
		IAtomContainer	mol,
		boolean	keepSprites
	)

Loads the given graph into the graph viewer.

Parameters

dnGraph	the graph to load.
mol	the molecular representation of the graph. Use this to avoid converting the graph into a molecular representation every time you load the same graph.
keepSprites	if `true` we'll keep track of old labels.

Definition at line 245 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfMolViewer(), denoptim.gui.GraphVertexMolViewerPanel.dnGraph, denoptim.gui.GraphVertexMolViewerPanel.EMPTYCARDNAME, denoptim.gui.MoleculeViewPanel.loadChemicalStructure(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), denoptim.gui.GraphVertexMolViewerPanel.molViewer, and denoptim.gui.GraphVertexMolViewerPanel.MOLVIEWERCARDNAME.

Referenced by denoptim.gui.GUIGraphHandler.createEmptyVertexAndPlaceItInGraph(), denoptim.gui.GUIGraphHandler.initialize(), denoptim.gui.GUIGraphHandler.loadCurrentGraphIdxToViewer(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), denoptim.gui.GUIGraphHandler.startGraphFromFragSpaceOrCreationOfEmptyVertex(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

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◆ moveDividerLocation()

void denoptim.gui.GraphVertexMolViewerPanel.moveDividerLocation ( )

Moved the divider to the location configured by some content-based reasoning.

Definition at line 539 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.defDivLoc.

Referenced by denoptim.gui.GUIGraphHandler.paint().

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◆ removeNestedGraphViewer()

void denoptim.gui.GraphVertexMolViewerPanel.removeNestedGraphViewer ( )

private

Definition at line 378 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.dispose(), denoptim.gui.GraphVertexMolViewerPanel.fragViewerCardHolder, and denoptim.gui.GraphVertexMolViewerPanel.fragViewerTmplViewerCard.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.resetFragViewerCardDeck(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

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◆ renderMolVieverToNeedUpdate()

void denoptim.gui.GraphVertexMolViewerPanel.renderMolVieverToNeedUpdate ( )

Triggers the generation of the molecular representation of the loaded graph.

Definition at line 299 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfMolViewer(), denoptim.gui.MoleculeViewPanel.clearAll(), denoptim.gui.GraphVertexMolViewerPanel.molViewer, and denoptim.gui.GraphVertexMolViewerPanel.UPDATETOVIEW.

Referenced by denoptim.gui.GUIGraphHandler.createEmptyVertexAndPlaceItInGraph(), and denoptim.gui.GUIGraphHandler.initialize().

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◆ resetFragViewerCardDeck()

void denoptim.gui.GraphVertexMolViewerPanel.resetFragViewerCardDeck ( )

Changes the appearance of the vertex visualisation panel to an empty card that is consistent with the presence or lack of a loaded fragment space.

Definition at line 364 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfVertexViewer(), denoptim.gui.FragmentViewPanel.clearAll(), denoptim.gui.GraphVertexMolViewerPanel.EMPTYCARDNAME, denoptim.gui.GraphVertexMolViewerPanel.fragViewer, and denoptim.gui.GraphVertexMolViewerPanel.removeNestedGraphViewer().

Referenced by denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), denoptim.gui.GUIGraphHandler.loadFragmentSpace(), and denoptim.gui.GraphVertexMolViewerPanel.NodeClickedListener.propertyChange().

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◆ setMouseMode()

void denoptim.gui.GraphVertexMolViewerPanel.setMouseMode ( ModalGraphMouse.Mode mode )

Alters the functionality of mouse in the graph visualization panel.

Parameters

mode	the mode of action of the mouse.

Definition at line 664 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.graphViewer, and denoptim.gui.GraphViewerPanel.setMouseMode().

Referenced by denoptim.gui.GUIGraphHandler.initialize(), and denoptim.gui.GraphVertexMolViewerPanel.MouseModeChoiceListener.propertyChange().

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◆ updateMolevularViewer()

IAtomContainer denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer ( )

Updates the molecular representation of the loaded graph.

We rebuild the molecular representation. This method is needed in case of changes to the loaded graph, to project those changes in the graph into the molecular representation.

Definition at line 316 of file GraphVertexMolViewerPanel.java.

References denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfMolViewer(), denoptim.gui.GraphVertexMolViewerPanel.builder, denoptim.gui.MoleculeViewPanel.clearAll(), denoptim.graph.DGraph.containsAtoms(), denoptim.molecularmodeling.ThreeDimTreeBuilder.convertGraphTo3DAtomContainer(), denoptim.gui.GraphVertexMolViewerPanel.dnGraph, denoptim.gui.GraphVertexMolViewerPanel.EMPTYCARDNAME, denoptim.gui.GUI.GUILOGGER, denoptim.gui.MoleculeViewPanel.loadChemicalStructure(), denoptim.gui.GraphVertexMolViewerPanel.molViewer, denoptim.gui.GraphVertexMolViewerPanel.MOLVIEWERCARDNAME, denoptim.gui.GUI.PRNG, and denoptim.utils.MoleculeUtils.removeUsedRCA().

Referenced by denoptim.gui.GUIGraphHandler.saveUnsavedChanges().

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◆ visualizeVertexInNestedViewer()

void denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer ( Vertex v )

private

Makes a clone of the given vertex and loads that clone into the nested visualization frame.

Parameters

v	the original vertex

Definition at line 458 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), and denoptim.gui.GraphVertexMolViewerPanel.NodeClickedListener.propertyChange().

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Member Data Documentation

◆ builder

final IChemObjectBuilder denoptim.gui.GraphVertexMolViewerPanel.builder

staticprivate

Initial value:

=

SilentChemObjectBuilder.getInstance()

Definition at line 109 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer().

◆ DEFDIVLOC

final double denoptim.gui.GraphVertexMolViewerPanel.DEFDIVLOC = 0.5

private

Definition at line 106 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ defDivLoc

double denoptim.gui.GraphVertexMolViewerPanel.defDivLoc = DEFDIVLOC

private

Definition at line 107 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), and denoptim.gui.GraphVertexMolViewerPanel.moveDividerLocation().

◆ dnGraph

DGraph denoptim.gui.GraphVertexMolViewerPanel.dnGraph

private

The unsaved version of the currently loaded graph.

Definition at line 73 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearCurrentSystem(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), and denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer().

◆ EMPTYCARDNAME

final String denoptim.gui.GraphVertexMolViewerPanel.EMPTYCARDNAME = "emptyCard"

protected

Definition at line 97 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearMolecularViewer(), denoptim.gui.GraphVertexMolViewerPanel.clearVertexViewer(), denoptim.gui.GraphVertexMolViewerPanel.initialize(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), denoptim.gui.GUIGraphHandler.removeCurrentDnGraph(), denoptim.gui.GraphVertexMolViewerPanel.resetFragViewerCardDeck(), and denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer().

◆ fragViewer

FragmentViewPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewer

protected

Definition at line 82 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearVertexViewer(), denoptim.gui.GraphVertexMolViewerPanel.dispose(), denoptim.gui.GraphVertexMolViewerPanel.initialize(), denoptim.gui.GraphVertexMolViewerPanel.resetFragViewerCardDeck(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ fragViewerCardHolder

JPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerCardHolder

private

Definition at line 85 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfVertexViewer(), denoptim.gui.GraphVertexMolViewerPanel.initialize(), denoptim.gui.GraphVertexMolViewerPanel.removeNestedGraphViewer(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ FRAGVIEWERCARDNAME

final String denoptim.gui.GraphVertexMolViewerPanel.FRAGVIEWERCARDNAME = "fragViewerCard"

protected

Definition at line 101 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ fragViewerEmptyCard

JPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerEmptyCard

private

Definition at line 86 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ fragViewerHeader

JPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerHeader

private

Definition at line 84 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ fragViewerNoFSCard

JPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerNoFSCard

private

Definition at line 88 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ fragViewerNotDuableCard

JPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerNotDuableCard

private

Definition at line 87 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ fragViewerPanel

JPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerPanel

private

Definition at line 83 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ fragViewerTmplViewerCard

GraphVertexMolViewerPanel denoptim.gui.GraphVertexMolViewerPanel.fragViewerTmplViewerCard

private

Definition at line 89 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.dispose(), denoptim.gui.GraphVertexMolViewerPanel.removeNestedGraphViewer(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ graphViewer

GraphViewerPanel denoptim.gui.GraphVertexMolViewerPanel.graphViewer

protected

Definition at line 103 of file GraphVertexMolViewerPanel.java.

◆ leftPane

JSplitPane denoptim.gui.GraphVertexMolViewerPanel.leftPane

private

Definition at line 81 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize(), and denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer().

◆ molViewer

MoleculeViewPanel denoptim.gui.GraphVertexMolViewerPanel.molViewer

protected

Definition at line 90 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.clearMolecularViewer(), denoptim.gui.GraphVertexMolViewerPanel.dispose(), denoptim.gui.GraphVertexMolViewerPanel.initialize(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), denoptim.gui.GraphVertexMolViewerPanel.renderMolVieverToNeedUpdate(), and denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer().

◆ molViewerCardHolder

JPanel denoptim.gui.GraphVertexMolViewerPanel.molViewerCardHolder

private

Definition at line 93 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.bringCardToTopOfMolViewer(), and denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ MOLVIEWERCARDNAME

final String denoptim.gui.GraphVertexMolViewerPanel.MOLVIEWERCARDNAME = "molViewerCard"

protected

Definition at line 100 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize(), denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer(), and denoptim.gui.GraphVertexMolViewerPanel.updateMolevularViewer().

◆ molViewerEmptyCard

JPanel denoptim.gui.GraphVertexMolViewerPanel.molViewerEmptyCard

private

Definition at line 94 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ molViewerHeader

JPanel denoptim.gui.GraphVertexMolViewerPanel.molViewerHeader

private

Definition at line 92 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ molViewerNeedUpdateCard

JPanel denoptim.gui.GraphVertexMolViewerPanel.molViewerNeedUpdateCard

private

Definition at line 95 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ molViewerPanel

JPanel denoptim.gui.GraphVertexMolViewerPanel.molViewerPanel

private

Definition at line 91 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ NOFSCARDNAME

final String denoptim.gui.GraphVertexMolViewerPanel.NOFSCARDNAME = "noFSCard"

protected

Definition at line 96 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize().

◆ NOTDUABLECARDNAME

final String denoptim.gui.GraphVertexMolViewerPanel.NOTDUABLECARDNAME = "notDoableCard"

protected

Definition at line 98 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize(), and denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ oldGSStatus

JUNGGraphSnapshot denoptim.gui.GraphVertexMolViewerPanel.oldGSStatus

private

The snapshot of the old (removed) visualized GraphStrem system.

Used only to remember stuff like sprites and node positions.

Definition at line 79 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.loadDnGraphToViewer().

◆ serialVersionUID

final long denoptim.gui.GraphVertexMolViewerPanel.serialVersionUID = 1L

staticprivate

Version UID.

Definition at line 68 of file GraphVertexMolViewerPanel.java.

◆ TMPLVIEWERCARDNAME

final String denoptim.gui.GraphVertexMolViewerPanel.TMPLVIEWERCARDNAME = "tmplViewwerCard"

protected

Definition at line 102 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.visualizeVertexInNestedViewer().

◆ UPDATETOVIEW

final String denoptim.gui.GraphVertexMolViewerPanel.UPDATETOVIEW = "updateCard"

protected

Definition at line 99 of file GraphVertexMolViewerPanel.java.

Referenced by denoptim.gui.GraphVertexMolViewerPanel.initialize(), and denoptim.gui.GraphVertexMolViewerPanel.renderMolVieverToNeedUpdate().

The documentation for this class was generated from the following file:

/github/workspace/src/main/java/denoptim/gui/GraphVertexMolViewerPanel.java

Classes

Public Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Static Private Attributes

Detailed Description

Constructor & Destructor Documentation

◆ GraphVertexMolViewerPanel()

Member Function Documentation

◆ alterLabels()

◆ bringCardToTopOfMolViewer()

◆ bringCardToTopOfVertexViewer()

◆ clearCurrentSystem()

◆ clearMolecularViewer()

◆ clearVertexViewer()

◆ dispose()

◆ getAPsSelectedInViewer()

◆ getSelectedNodesInViewer()

◆ hasSelectedNodes()

◆ initialize()

◆ loadDnGraphToViewer() [1/2]

◆ loadDnGraphToViewer() [2/2]

◆ moveDividerLocation()

◆ removeNestedGraphViewer()

◆ renderMolVieverToNeedUpdate()

◆ resetFragViewerCardDeck()

◆ setMouseMode()

◆ updateMolevularViewer()

◆ visualizeVertexInNestedViewer()

Member Data Documentation

◆ builder

◆ DEFDIVLOC

◆ defDivLoc

◆ dnGraph

◆ EMPTYCARDNAME

◆ fragViewer

◆ fragViewerCardHolder

◆ FRAGVIEWERCARDNAME

◆ fragViewerEmptyCard

◆ fragViewerHeader

◆ fragViewerNoFSCard

◆ fragViewerNotDuableCard

◆ fragViewerPanel

◆ fragViewerTmplViewerCard

◆ graphViewer

◆ leftPane

◆ molViewer

◆ molViewerCardHolder

◆ MOLVIEWERCARDNAME

◆ molViewerEmptyCard

◆ molViewerHeader

◆ molViewerNeedUpdateCard

◆ molViewerPanel

◆ NOFSCARDNAME

◆ NOTDUABLECARDNAME

◆ oldGSStatus

◆ serialVersionUID

◆ TMPLVIEWERCARDNAME

◆ UPDATETOVIEW