- b -

b : denoptim.ga.EAUtilsTest, denoptim.graph.DGraphTest
B3D : denoptim.main.Main.RunType
B3D_PARAM : denoptim.files.FileFormat, denoptim.files.FileFormat.DataKind
BBID : denoptim.gui.GraphViewerPanel.LabelType
BBTFRAG : denoptim.fragspace.FragmentSpaceTest
bbtTolTip : denoptim.gui.GUIGraphHandler.ConfigTemplateDialog.TemplateConfiguration
bbTypeCmb : denoptim.gui.GUIGraphHandler.ConfigTemplateDialog.TemplateConfiguration
BBTYPEKEY : denoptim.gui.GUIGraphHandler
bestMapping : denoptim.fragmenter.FragmentAlignement
bgGrowthMode : denoptim.gui.GAParametersForm
block : denoptim.gui.FitnessParametersForm, denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm, denoptim.gui.GAParametersForm, denoptim.gui.GUIPrepareFitnessRunner.InputForm
bndTyp : denoptim.graph.APClass, denoptim.graph.Ring, denoptim.graph.rings.RingClosingAttractor
bo : denoptim.graph.Edge.BondType, denoptim.json.LWBond
BONDPROPROTATABLE : denoptim.constants.DENOPTIMConstants
bonds : denoptim.graph.rings.CyclicGraphHandler.ClosableConf
BONDSKEY : denoptim.json.IAtomContainerSerializer
bondsPathVAVB : denoptim.graph.rings.PathSubGraph
bondType : denoptim.graph.Edge, denoptim.graph.EdgeQuery, denoptim.graph.simplified.NodeConnection, denoptim.graph.simplified.UndirectedEdge
border : denoptim.gui.GUITextReader
BRANCH : denoptim.utils.CrossoverType
bridgeHeadFindingRules : denoptim.graph.rings.RingClosureParameters
bridgeHeadPositions : denoptim.fragmenter.BridgeHeadFindingRule
bt : denoptim.gui.GraphViewerPanel.JEdge
BT : denoptim.gui.GraphViewerPanel.LabelType, denoptim.io.DenoptimIOTest
btnAdd : denoptim.gui.CompatibilityMatrixForm.CompatibilityRuleLine
btnAddCapping : denoptim.gui.CompatibilityMatrixForm
btnAddChord : denoptim.gui.GUIGraphHandler
btnAddCompRul : denoptim.gui.CompatibilityMatrixForm
btnAddEmptyVrtx : denoptim.gui.GUIGraphHandler
btnAddFrbEnd : denoptim.gui.CompatibilityMatrixForm
btnAddGraph : denoptim.gui.GUIGraphHandler
btnAddLibVrtx : denoptim.gui.GUIGraphHandler
btnAddSymSet : denoptim.gui.GUIGraphHandler
btnAddVrtx : denoptim.gui.GUIVertexInspector
btnAPDelete : denoptim.gui.GUIEmptyVertexMaker
btnAPInsert : denoptim.gui.GUIEmptyVertexMaker
btnAtmToAP : denoptim.gui.GUIVertexInspector
btnCanc : denoptim.gui.GUIModalDialog
btnChop : denoptim.gui.GUIVertexInspector
btnClearMatch : denoptim.gui.CompatibilityMatrixForm
btnCopyCompRul : denoptim.gui.CompatibilityMatrixForm
btnCPMat : denoptim.gui.FSParametersForm
btnDDValueParams : denoptim.gui.FitnessParametersForm
BTNDEF : denoptim.gui.CompatibilityMatrixForm.TargetAPClassToken
btnDel : denoptim.gui.CompatibilityMatrixForm.TargetAPClassToken
btnDelCapping : denoptim.gui.CompatibilityMatrixForm
btnDelCompRul : denoptim.gui.CompatibilityMatrixForm
btnDelFrbEnd : denoptim.gui.CompatibilityMatrixForm
btnDelSel : denoptim.gui.GUIGraphHandler, denoptim.gui.GUIVertexInspector
btnDelVrtx : denoptim.gui.GUIVertexInspector
btnDone : denoptim.gui.GUIModalDialog
btnEmptFrag : denoptim.gui.GUIVertexInspector
btnExtra : denoptim.gui.GUIModalDialog
btnFitProviderSource : denoptim.gui.FitnessParametersForm
btnFPSource : denoptim.gui.FitnessParametersForm
btnFragSpace : denoptim.gui.GUIGraphHandler
btnFrgMols : denoptim.gui.GAParametersForm
btnFSESource : denoptim.gui.FSEParametersForm
btnFSSource : denoptim.gui.FSParametersForm
btnGASource : denoptim.gui.GAParametersForm
btnGraphDel : denoptim.gui.GUIGraphHandler
btnHelpCapping : denoptim.gui.CompatibilityMatrixForm
btnHelpCPMap : denoptim.gui.CompatibilityMatrixForm
btnHelpFrbEnd : denoptim.gui.CompatibilityMatrixForm
btnImportAPClasses : denoptim.gui.GUICompatibilityMatrixTab
btnLabAPC : denoptim.gui.GUIGraphHandler
btnLabBB : denoptim.gui.GUIGraphHandler
btnLabBT : denoptim.gui.GUIGraphHandler
btnLoadCPMap : denoptim.gui.GUICompatibilityMatrixTab
btnLoadFPSource : denoptim.gui.FitnessParametersForm
btnLoadFSESource : denoptim.gui.FSEParametersForm
btnLoadFSSource : denoptim.gui.FSParametersForm
btnLoadGASource : denoptim.gui.GAParametersForm
btnMolToGraph : denoptim.gui.GAParametersForm
btnMoveMode : denoptim.gui.GUIGraphHandler
btnOpenGraphs : denoptim.gui.GUIGraphHandler
btnOpenMol : denoptim.gui.GUIVertexInspector
btnOpenSMILES : denoptim.gui.GUIVertexInspector
btnOpenVrtxs : denoptim.gui.GUIVertexInspector
btnPar1 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm
btnPar11Cleanup : denoptim.gui.FSParametersForm
btnPar11Insert : denoptim.gui.FSParametersForm
btnPar12 : denoptim.gui.FSEParametersForm
btnPar2 : denoptim.gui.FSParametersForm
btnPar20 : denoptim.gui.GAParametersForm
btnPar21 : denoptim.gui.GAParametersForm
btnPar21Cleanup : denoptim.gui.FSParametersForm
btnPar21Insert : denoptim.gui.FSParametersForm
btnPar22 : denoptim.gui.GAParametersForm
btnPar22Cleanup : denoptim.gui.FSParametersForm
btnPar22Insert : denoptim.gui.FSParametersForm
btnPar3 : denoptim.gui.FSEParametersForm, denoptim.gui.FSParametersForm
btnPar30 : denoptim.gui.FSParametersForm
btnPar31 : denoptim.gui.FSParametersForm
btnPar4 : denoptim.gui.FSEParametersForm
btnPar5 : denoptim.gui.FSParametersForm
btnPar6 : denoptim.gui.FSParametersForm
btnPar9 : denoptim.gui.FSEParametersForm
btnPickMode : denoptim.gui.GUIGraphHandler
BTNPRESS : denoptim.gui.CompatibilityMatrixForm.TargetAPClassToken
btnPropTagsCleanup : denoptim.gui.GUIPreferencesDialog
btnPropTagsInsert : denoptim.gui.GUIPreferencesDialog
btnSaveEdits : denoptim.gui.GUIGraphHandler, denoptim.gui.GUIVertexInspector
btnSortCapping : denoptim.gui.CompatibilityMatrixForm
btnSortFrbEnd : denoptim.gui.CompatibilityMatrixForm
btnSwitchTo2DViewer : denoptim.gui.VertexViewPanel
btnSwitchToMolViewer : denoptim.gui.VertexViewPanel
btnSwitchToNodeViewer : denoptim.gui.VertexViewPanel
BUILDANEWATTEMPTS : denoptim.logging.CounterID
buildAnewFailureTolerant : denoptim.programs.denovo.GAParameters
buildChelatesMode : denoptim.graph.rings.RingClosureParameters
builder : denoptim.fragmenter.ClusterableFragmentTest, denoptim.fragmenter.ConformerExtractorTaskTest, denoptim.fragmenter.DynamicCentroidClusterTest, denoptim.fragmenter.FragmentAlignementTest, denoptim.fragmenter.FragmentClustererTest, denoptim.fragmenter.FragmenterToolsTest, denoptim.fragmenter.ParallelFragmentationAlgorithmTest, denoptim.ga.EAUtilsTest, denoptim.gui.GraphVertexMolViewerPanel, denoptim.gui.GUIGraphHandler, denoptim.io.DenoptimIO, denoptim.json.DENOPTIMgsonTest, denoptim.json.IAtomContainerDeserializer, denoptim.molecularmodeling.ThreeDimTreeBuilder, denoptim.utils.FormulaUtilsTest, denoptim.utils.MoleculeUtils, denoptim.utils.MoleculeUtilsTest, denoptim.utils.RotationalSpaceUtils
buildingBlockId : denoptim.graph.Vertex, denoptim.graph.VertexQuery
buildingBlocksSpace : denoptim.fragspace.FragmentSpaceParameters
buildingBlockType : denoptim.graph.Vertex, denoptim.graph.VertexQuery
builtAnewWeight : denoptim.programs.denovo.GAParameters