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denoptim.graph.Template.ContractLevel Enum Reference

Enum specifying to what extent the template's inner graph can be changed. More...

Public Attributes

 FREE
 Inner graphs are free to change within the confines of the required AttachmentPoints. More...
 
 FIXED
 Inner graphs are effectively equivalent to the Fragment class, as no change in the inner structure is allowed. More...
 
 FIXED_STRUCT
 Inner graph keep the same structure, but the identify of vertices can change. More...
 

Detailed Description

Enum specifying to what extent the template's inner graph can be changed.

Definition at line 104 of file Template.java.

Member Data Documentation

◆ FIXED

denoptim.graph.Template.ContractLevel.FIXED

Inner graphs are effectively equivalent to the Fragment class, as no change in the inner structure is allowed.

Definition at line 116 of file Template.java.

Referenced by denoptim.ga.EAUtils.buildGraph(), denoptim.graph.Template.freezeTemplate(), denoptim.ga.GraphOperations.locateCompatibleXOverPoints(), denoptim.graph.DGraphTest.testGetMutationSites(), denoptim.ga.GraphOperationsTest.testLocateCompatibleXOverPoints(), and denoptim.ga.EAUtilsTest.testMakeGraphFromFragmentationOfMol().

◆ FIXED_STRUCT

denoptim.graph.Template.ContractLevel.FIXED_STRUCT

Inner graph keep the same structure, but the identify of vertices can change.

Effectively this contract allows only {@value MutationType::CHANGELINK} mutation.

Definition at line 125 of file Template.java.

Referenced by denoptim.ga.GraphOperations.checkAndAddXoverSites(), denoptim.ga.GraphOperations.locateCompatibleXOverPoints(), denoptim.ga.EAUtilsTest.prepare(), denoptim.graph.Template.setContractLevel(), denoptim.ga.EAUtilsTest.testBuildByXOver_Embedded_FixedStructure(), denoptim.ga.GraphOperationsTest.testLocateCompatibleXOverPoints(), and denoptim.graph.Template.updateMutTypeToFixedSTructure().

◆ FREE

denoptim.graph.Template.ContractLevel.FREE

Inner graphs are free to change within the confines of the required AttachmentPoints.

Definition at line 109 of file Template.java.

Referenced by denoptim.graph.DGraph.embedPatternsInTemplates(), denoptim.ga.GraphOperationsTest.getPairOfTestGraphs(), denoptim.ga.PopulationTest.getPairOfTestGraphsB(), denoptim.ga.PopulationTest.getPairOfTestGraphsBxo(), denoptim.ga.PopulationTest.getPairOfTestGraphsBxoxo(), denoptim.gui.MolToGraphParametersDialog.MolToGraphParametersDialog(), denoptim.ga.EAUtilsTest.testBuildByXOver_Embedded_Free(), denoptim.ga.EAUtilsTest.testBuildByXOver_Embedded_FreeBackwards(), denoptim.graph.DGraphTest.testGetMutationSites(), and denoptim.ga.GraphOperationsTest.testLocateCompatibleXOverPoints().

The documentation for this enum was generated from the following file: