An attachment point (AP) is a possibility to attach a Vertex onto the vertex holding the AP (i.e., the owner of the AP), this way forming a new Edge (i.e., the user of the AP). More...

Inheritance diagram for denoptim.graph.AttachmentPoint:

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Collaboration diagram for denoptim.graph.AttachmentPoint:

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Public Member Functions
	AttachmentPoint (Vertex owner)
	Constructor for undefined DENOPTIMAttachmentPoint. More...

	AttachmentPoint (Vertex owner, int atomPositionNumber)
	Constructor. More...

	AttachmentPoint (Vertex owner, int atomPosNum, APClass apClass)
	Constructor. More...

	AttachmentPoint (Vertex owner, int atomPosNum, Point3d dirVec, APClass apClass)
	Constructor. More...

	AttachmentPoint (Vertex owner, String str) throws DENOPTIMException
	Construct an attachment point based on the formatted string representation. More...

int	getID ()
	Returns a unique integer that is used to sort list of attachment points. More...

void	setID (int id)
	Sets the unique integer that is used to sort list of attachment points. More...

int	getAtomPositionNumber ()
	The index of the source atom in the atom list of the fragment. More...

void	setAtomPositionNumber (int atomPositionNumber)
	Set the index of the source atom in the list of atoms of the fragment. More...

int	getAtomPositionNumberInMol ()
	The index of the source atom in the atom list of the entire molecule. More...

void	setAtomPositionNumberInMol (int atomPositionNumberInMol)
	Set the index of the source atom in the list of atoms of the entire molecule. More...

BondType	getBondType ()
	Returns the bond type preferred by this attachment point as defined by the `APClass`, or null if `APClass` is null. More...

void	setDirectionVector (Point3d dirVec)
	Sets the end of the 3D vector defining the direction of the AP in 3D. More...

void	setAPClass (String apClass) throws DENOPTIMException
	Set the Attachment Point class. More...

void	setAPClass (APClass apClass)
	Set the Attachment Point class. More...

APClass	getAPClass ()
	Returns the Attachment Point class. More...

Point3d	getDirectionVector ()
	Returns the end of the direction vector. More...

int	getCutId ()

void	setCutId (int id)

boolean	isAvailable ()
	Check availability of this attachment point. More...

boolean	isAvailableThroughout ()
	Check availability of this attachment point throughout the graph level, i.e., check also across the inner graph template boundary. More...

boolean	isClassEnabled ()
	Checks if this attachment point respects the APClass-based approach. More...

int	compareTo (AttachmentPoint other)
	Compares this and another attachment points based on their unique identifier. More...

int	comparePropertiesTo (AttachmentPoint other)
	Compares this and given attachment point. More...

boolean	sameAs (AttachmentPoint other)
	Compares the features of this and another attachment point and decides if the two are same. More...

boolean	sameAs (AttachmentPoint other, StringBuilder reason)
	Compares the features of this and another attachment point and decides if the two are same. More...

AttachmentPoint	clone ()
	Returns a deep clone of this attachment point. More...

String	getSingleAPStringSDF (boolean isFirst, int srcAtmID)
	Prepare a string for writing this AP in a fragment SDF file. More...

String	getSingleAPStringSDF (boolean isFirst)
	Prepare a string for writing this AP in a fragment SDF file. More...

String	toStringNoId ()
	Produces a string with the information included in this object. More...

String	toString ()
	Produces a string with the information included in this object. More...

void	setOwner (Vertex owner)
	Sets the reference to the vertex that owns this attachment point. More...

Vertex	getOwner ()

void	setUser (Edge edge)
	Sets the reference to the edge that is using this attachment point. More...

Edge	getEdgeUser ()
	Gets the edge that is using this AP, or null if no edge is using this AP. More...

Edge	getEdgeUserThroughout ()
	Gets the edge that is using this AP, or null if no edge is using this AP. More...

AttachmentPoint	getEmbeddedAP ()
	For vertices that are templates this method returns the attachment point that is embedded in the template's inner graph. More...

AttachmentPoint	getLinkedAP ()
	Gets the attachment point (AP) that is connected to this AP via the edge user. More...

AttachmentPoint	getLinkedAPThroughout ()
	Gets the attachment point (AP) that is connected to this AP via the edge user or in any edge user that might be external to the template embedding the graph where this AP is directly reachable. More...

boolean	isSrcInUserThroughout ()
	Checks the role of this AP in the user or in any user that might be external to the template embedding the graph where this AP is directly reachable. More...

boolean	isSrcInUser ()
	Checks the role of this AP in the user. More...

int	getIndexInOwner ()

boolean	hasSameSrcAtom (AttachmentPoint other)

boolean	hasConnectedSrcAtom (AttachmentPoint other)
	Checks if this and another APs are rooted on atoms that are bonded in any way other than a possible connection resulting by an edge made in between this and the other AP. More...

Map< Object, Object >	getProperties ()

Object	getProperty (Object description)

void	setProperty (Object key, Object property)

Static Public Member Functions
static Object[]	processSdfString (String str) throws DENOPTIMException
	Parses the string format used to record one attachment point in SDF files. More...

static String	getAPDefinitionsForSDF (LinkedHashMap< Integer, List< AttachmentPoint > > apsPerIndex)
	Prepares the two strings that can be used to define `AttachmentPoint`s in SDF files. More...

Private Member Functions
	AttachmentPoint (Vertex owner, int atomPositionNumber, Point3d dirVec)
	Constructor. More...

Private Attributes
int	id
	Index used to keep the order in a list of attachment points. More...

int	atomPositionNumber = -1
	The index of the source atom in the atom list of the fragment (0-based) More...

int	atomPositionNumberInMol = -1
	The index of the source atom in the atom list of the entire molecule (0-based) More...

APClass	apClass
	The attachment point class. More...

Point3d	dirVec
	The direction vector representing the bond direction. More...

Vertex	owner
	The vertex to which this AP is attached to. More...

Edge	user
	The edge that is using this AP, if any. More...

int	cutId
	Identifier of the cut operation that generated this AP. More...

Map< Object, Object >	properties
	Map of customisable properties. More...

Detailed Description

An attachment point (AP) is a possibility to attach a Vertex onto the vertex holding the AP (i.e., the owner of the AP), this way forming a new Edge (i.e., the user of the AP).

It can be annotated with the index (position) of an atom in the molecule, which is called the attachment point's source atom, three-dimensional information in the form of Cartesian coordinates, and information on the kind of attachment point in terms of APClass.

Author: Vishwesh Venkatraman; Marco Foscato

Definition at line 52 of file AttachmentPoint.java.

Constructor & Destructor Documentation

◆ AttachmentPoint() [1/6]

denoptim.graph.AttachmentPoint.AttachmentPoint ( Vertex owner )

Constructor for undefined DENOPTIMAttachmentPoint.

Parameters

owner the vertex that holds the attachment point under creation.

Definition at line 107 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.owner.

Referenced by denoptim.graph.AttachmentPoint.clone().

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◆ AttachmentPoint() [2/6]

denoptim.graph.AttachmentPoint.AttachmentPoint	(	Vertex	owner,
		int	atomPositionNumber
	)

Constructor.

Parameters

owner	the vertex that holds the attachment point under creation.
atomPositionNumber	the index of the source atom (0-based)

Definition at line 119 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.atomPositionNumber, and denoptim.graph.AttachmentPoint.owner.

◆ AttachmentPoint() [3/6]

denoptim.graph.AttachmentPoint.AttachmentPoint	(	Vertex	owner,
		int	atomPositionNumber,
		Point3d	dirVec
	)

private

Constructor.

Parameters

owner	the vertex that holds the attachment point under creation.
atomPositionNumber	the index of the source atom (0-based)
dirVec	the AP direction vector end (the beginning are the coords of the source atom). This array must have 3 entries.

Definition at line 133 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.atomPositionNumber, denoptim.graph.AttachmentPoint.dirVec, and denoptim.graph.AttachmentPoint.owner.

◆ AttachmentPoint() [4/6]

denoptim.graph.AttachmentPoint.AttachmentPoint	(	Vertex	owner,
		int	atomPosNum,
		APClass	apClass
	)

Constructor.

Parameters

owner	the vertex that holds the attachment point under creation.
atomPosNum	the index of the source atom (0-based)
apClass	the APClass

Definition at line 156 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, and denoptim.graph.AttachmentPoint.owner.

◆ AttachmentPoint() [5/6]

denoptim.graph.AttachmentPoint.AttachmentPoint	(	Vertex	owner,
		int	atomPosNum,
		Point3d	dirVec,
		APClass	apClass
	)

Constructor.

Parameters

owner	the vertex that holds the attachment point under creation.
atomPosNum	the index of the source atom (0-based)
dirVec	the AP direction vector end (the beginning at the coordinates of the source atom). This must array have 3 entries.
apClass	the APClass

Definition at line 178 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.AttachmentPoint.dirVec, denoptim.graph.Vertex.getUniqueAPIndex(), and denoptim.graph.AttachmentPoint.owner.

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◆ AttachmentPoint() [6/6]

denoptim.graph.AttachmentPoint.AttachmentPoint	(	Vertex	owner,
		String	str
	)		throws DENOPTIMException

Construct an attachment point based on the formatted string representation.

The format is the one used in SDF files.

Parameters

owner	the vertex this AP is owned by.
str	the formatted string.

Exceptions

DENOPTIMException

Definition at line 200 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.owner, and denoptim.graph.AttachmentPoint.processSdfString().

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Member Function Documentation

◆ clone()

AttachmentPoint denoptim.graph.AttachmentPoint.clone ( )

Returns a deep clone of this attachment point.

Returns: a deep clone

Definition at line 719 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.AttachmentPoint.atomPositionNumber, denoptim.graph.AttachmentPoint.AttachmentPoint(), denoptim.graph.APClass.clone(), denoptim.graph.AttachmentPoint.dirVec, denoptim.graph.AttachmentPoint.getOwner(), denoptim.graph.AttachmentPoint.properties, and denoptim.graph.AttachmentPoint.setProperty().

Referenced by denoptim.graph.Template.addInnerToOuterAPMapping(), denoptim.graph.rings.PathSubGraph.findPath(), and denoptim.graph.AttachmentPointTest.testClone().

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◆ comparePropertiesTo()

int denoptim.graph.AttachmentPoint.comparePropertiesTo ( AttachmentPoint other )

Compares this and given attachment point.

This method defines how AttachmentPoints are sorted not by natural order, but by consistency of properties.

Parameters

other.

Returns: an integer that can be used by a comparator.

Definition at line 581 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.APClass.compareTo(), denoptim.graph.AttachmentPoint.getAPClass(), denoptim.graph.AttachmentPoint.getAtomPositionNumber(), denoptim.graph.AttachmentPoint.getDirectionVector(), and denoptim.graph.AttachmentPoint.sameAs().

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◆ compareTo()

int denoptim.graph.AttachmentPoint.compareTo ( AttachmentPoint other )

Compares this and another attachment points based on their unique identifier.

This is done to retain the order of attachment points when regenerating AP lists multiple times.

Parameters

other the attachment point to compare this with.

Returns: an integer that can be used by a comparator

Definition at line 567 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getID().

Referenced by denoptim.graph.AttachmentPointComparator.compare(), and denoptim.graph.AttachmentPointTest.testSameAs().

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◆ getAPClass()

APClass denoptim.graph.AttachmentPoint.getAPClass ( )

Returns the Attachment Point class.

Returns: the APClass or null.

Definition at line 447 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass.

Referenced by denoptim.ga.GraphOperations.addRing(), denoptim.graph.rings.CyclicGraphHandler.checkChelatesGraph(), denoptim.fragspace.FragmentSpace.classifyFragment(), denoptim.graph.AttachmentPoint.comparePropertiesTo(), denoptim.ga.GraphOperations.extendGraph(), denoptim.utils.MoleculeUtils.extractIACForSubgraph(), denoptim.fragspace.APMapFinder.findMappingCompatibileAPs(), denoptim.graph.FragIsomorphNode.FragIsomorphNode(), denoptim.ga.GraphOperations.getFrgApForSrcAp(), denoptim.ga.GraphOperations.getRCVForSrcAp(), denoptim.graph.Edge.getSrcAPClass(), denoptim.graph.Edge.getTrgAPClass(), denoptim.fragspace.GraphLinkFinder.GraphLinkFinder(), denoptim.graph.Fragment.identifySymmetryRelatedAPSets(), denoptim.graph.Template.isValidInnerGraph(), denoptim.gui.GraphViewerPanel.JEdge.JEdge(), denoptim.fragspace.FragsCombinationIterator.next(), denoptim.graph.simplified.Node.Node(), denoptim.gui.FragmentViewPanel.putAPsFromTableIntoIAtomContainer(), denoptim.graph.DGraph.removeChainUpToBranching(), denoptim.graph.DGraph.removeSingleVertexAndWeld(), denoptim.graph.DGraph.replaceUnusedRCVsWithCapps(), denoptim.graph.AttachmentPoint.sameAs(), denoptim.graph.AttachmentPointTest.testClone(), denoptim.graph.TemplateTest.testClone(), denoptim.fragspace.FragmentSpaceTest.testGetFragAPsCompatibleWithClass(), denoptim.fragspace.FragmentSpaceTest.testGetFragAPsCompatibleWithTheseAPs(), denoptim.fragspace.FragmentSpaceTest.testGetFragsWithAPClass(), denoptim.graph.TemplateTest.testSameAPClass(), denoptim.graph.Edge.toString(), denoptim.graph.simplified.UndirectedEdge.UndirectedEdge(), and denoptim.graph.Template.updateInnerApID().

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◆ getAPDefinitionsForSDF()

static String denoptim.graph.AttachmentPoint.getAPDefinitionsForSDF ( LinkedHashMap< Integer, List< AttachmentPoint > > apsPerIndex )

static

Prepares the two strings that can be used to define AttachmentPoints in SDF files.

Parameters

apsPerIndex a map of AttachmentPoints grouped by index. The index may or may not be an index of an existing atom (i.e., we do not use it as such, but we just place if in the text-representation of the AP. This index is supposed to be 0-based (i.e., in this method it is transformed in 1-based).

Returns: the string meant the be the value of the DENOPTIMConstants#APSTAG tag in SDF file.

Definition at line 1235 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getSingleAPStringSDF(), and denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPATMS.

Referenced by denoptim.molecularmodeling.ThreeDimTreeBuilder.convertGraphTo3DAtomContainer(), denoptim.graph.Template.getIAtomContainer(), denoptim.graph.Fragment.projectAPsToProperties(), and denoptim.graph.Template.setIAtomContainer().

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◆ getAtomPositionNumber()

int denoptim.graph.AttachmentPoint.getAtomPositionNumber ( )

The index of the source atom in the atom list of the fragment.

The index is reported considering 0-based enumeration.

Returns: the index of the source atom in the atom list of the fragment

Definition at line 335 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.atomPositionNumber, and denoptim.graph.AttachmentPoint.owner.

Referenced by denoptim.molecularmodeling.ThreeDimTreeBuilder.append3DFragmentsViaEdges(), denoptim.graph.Template.clone(), denoptim.graph.AttachmentPoint.comparePropertiesTo(), denoptim.molecularmodeling.ThreeDimTreeBuilder.convertGraphTo3DAtomContainer(), denoptim.graph.rings.RingSizeManager.evaluateRCVPair(), denoptim.graph.Fragment.getAtomHoldingAP(), denoptim.ga.EAUtils.getCrowdedness(), denoptim.graph.Fragment.identifySymmetryRelatedAPSets(), denoptim.graph.Fragment.projectListAPToAtomProperties(), denoptim.graph.Fragment.projectPropertyToAP(), denoptim.gui.FragmentViewPanel.putAPsFromTableIntoIAtomContainer(), denoptim.graph.Fragment.removeAP(), denoptim.graph.AttachmentPoint.sameAs(), denoptim.graph.Template.setIAtomContainer(), denoptim.graph.AttachmentPointTest.testClone(), denoptim.graph.TemplateTest.testClone(), and denoptim.gui.FragmentViewPanel.updateAPsInJmolViewer().

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◆ getAtomPositionNumberInMol()

int denoptim.graph.AttachmentPoint.getAtomPositionNumberInMol ( )

The index of the source atom in the atom list of the entire molecule.

The index is reported considering 0-based enumeration.

Returns: the index of the source atom in the atom list of the entire molecule

Definition at line 362 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.atomPositionNumberInMol, and denoptim.graph.AttachmentPoint.owner.

Referenced by denoptim.graph.Template.getIAtomContainer().

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◆ getBondType()

BondType denoptim.graph.AttachmentPoint.getBondType ( )

Returns the bond type preferred by this attachment point as defined by the APClass, or null if APClass is null.

Returns: the bond type preferred by this attachment point as defined by the APClass, or null if APClass is null.

Definition at line 390 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.APClass.DEFAULTBT, and denoptim.graph.APClass.getBondType().

Referenced by denoptim.graph.DGraph.clone(), denoptim.utils.GraphConversionTool.getJGraphFromGraph(), and denoptim.graph.DGraph.insertSingleVertex().

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◆ getCutId()

int denoptim.graph.AttachmentPoint.getCutId ( )

Returns: the identifier of the cut operation that generated this AP.

Definition at line 469 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.cutId.

◆ getDirectionVector()

Point3d denoptim.graph.AttachmentPoint.getDirectionVector ( )

Returns the end of the direction vector.

The coordinates are referred to the same reference system of the fragment holding this AP.

Returns: the direction vector.

Definition at line 459 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.dirVec.

Referenced by denoptim.molecularmodeling.ThreeDimTreeBuilder.append3DFragmentsViaEdges(), denoptim.graph.Template.clone(), denoptim.graph.AttachmentPoint.comparePropertiesTo(), denoptim.molecularmodeling.ThreeDimTreeBuilder.convertGraphTo3DAtomContainer(), denoptim.graph.Template.getIAtomContainer(), denoptim.gui.FragmentViewPanel.putAPsFromTableIntoIAtomContainer(), denoptim.graph.Template.setIAtomContainer(), denoptim.graph.AttachmentPointTest.testClone(), denoptim.fragmenter.FragmentClustererTest.testCluster(), denoptim.fragmenter.ClusterableFragmentTest.testGetTransformedCopy(), and denoptim.gui.FragmentViewPanel.updateAPsInJmolViewer().

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◆ getEdgeUser()

Edge denoptim.graph.AttachmentPoint.getEdgeUser ( )

Gets the edge that is using this AP, or null if no edge is using this AP.

Does NOT account for embedding of the vertex in a template, i.e., this AP can be available in the graph (if any) owning the vertex this AP belongs to, but if the graph is itself the inner graph of a template, the AP is then projected on the template's surface and might be used to make an edge that uses the template as a single vertex. This method considers only any edge user that belongs to the graph owning the vertex that own this AP, if any such owners exist. See AttachmentPoint#getEdgeUserThroughout() to crossing the template boundary.

Returns: the edge that is using this AP.

Definition at line 929 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.graph.DGraph.fixEdgeDirections(), denoptim.graph.Vertex.getEdgeWith(), denoptim.graph.DGraph.replaceSingleSubGraph(), denoptim.graph.DGraph.setScaffold(), denoptim.graph.AttachmentPointTest.testClone(), and denoptim.graph.EdgeTest.testConnectionDeconnectionLoop().

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◆ getEdgeUserThroughout()

Edge denoptim.graph.AttachmentPoint.getEdgeUserThroughout ( )

Gets the edge that is using this AP, or null if no edge is using this AP.

This method does account for embedding of the vertex in a template, i.e., this AP can be available in the graph (if any) owning the vertex this AP belongs to, but if the graph is itself the inner graph of a template, the AP is then projected on the template's surface and might be used to make an edge that uses the template as a single vertex. This method considers any level of template embedding. See AttachmentPoint#getEdgeUser() to remain within the template boundary.

Returns: the edge that is using this AP.

Definition at line 948 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getEdgeUserThroughout(), denoptim.graph.Vertex.getGraphOwner(), denoptim.graph.Template.getOuterAPFromInnerAP(), denoptim.graph.AttachmentPoint.owner, denoptim.graph.DGraph.templateJacket, and denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.ga.GraphOperations.extendLink(), denoptim.graph.AttachmentPoint.getEdgeUserThroughout(), denoptim.graph.AttachmentPoint.getLinkedAPThroughout(), and denoptim.graph.AttachmentPoint.isSrcInUserThroughout().

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◆ getEmbeddedAP()

AttachmentPoint denoptim.graph.AttachmentPoint.getEmbeddedAP ( )

For vertices that are templates this method returns the attachment point that is embedded in the template's inner graph.

Effectively, it returns the original object of which this object is a projection on the templates surface.

Returns: this attachment point (for vertices that are no templates) or the original attachment point this is a projection of (for templates).

Definition at line 975 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getEmbeddedAP(), and denoptim.graph.AttachmentPoint.owner.

Referenced by denoptim.graph.AttachmentPointTest.checkIdentityOfEmbeddedAP(), denoptim.graph.AttachmentPoint.getEmbeddedAP(), denoptim.graph.AttachmentPoint.getLinkedAPThroughout(), denoptim.graph.Edge.getSrcAPThroughout(), denoptim.graph.Edge.getTrgAPThroughout(), denoptim.graph.AttachmentPoint.hasConnectedSrcAtom(), and denoptim.graph.AttachmentPoint.hasSameSrcAtom().

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◆ getID()

int denoptim.graph.AttachmentPoint.getID ( )

Returns a unique integer that is used to sort list of attachment points.

This index follows the order in which attachment points were generated.

Definition at line 312 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.id.

Referenced by denoptim.graph.AttachmentPoint.compareTo(), denoptim.graph.DGraph.embedPatternsInTemplates(), denoptim.gui.GraphViewerPanel.JVertex.JVertex(), denoptim.graph.Edge.DENOPTIMEdgeSerializer.serialize(), denoptim.graph.AttachmentPointTest.testClone(), and denoptim.graph.APMapping.toIntMappig().

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◆ getIndexInOwner()

int denoptim.graph.AttachmentPoint.getIndexInOwner ( )

Returns: the current index of this AP in the list of APs of the owner, or -1 if the owner is null.

Definition at line 1082 of file AttachmentPoint.java.

References denoptim.graph.Vertex.getIndexOfAP(), and denoptim.graph.AttachmentPoint.owner.

Referenced by denoptim.graph.Edge.compareAsUndirected(), denoptim.graph.DGraph.editGraph(), denoptim.gui.GUIGraphHandler.extendCurrentGraph(), denoptim.ga.GraphOperations.extendGraph(), denoptim.utils.MoleculeUtils.extractIACForSubgraph(), denoptim.gui.GraphViewerPanel.JEdge.JEdge(), denoptim.gui.GraphViewerPanel.JVertex.JVertex(), denoptim.graph.simplified.UndirectedEdge.makeInvariant(), denoptim.fragspace.FragsCombinationIterator.next(), denoptim.ga.GraphOperations.performCrossover(), denoptim.graph.DGraph.replaceSubGraph(), denoptim.graph.AttachmentPoint.sameAs(), denoptim.graph.APMapping.toIntMappig(), and denoptim.graph.simplified.UndirectedEdge.toString().

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◆ getLinkedAP()

AttachmentPoint denoptim.graph.AttachmentPoint.getLinkedAP ( )

Gets the attachment point (AP) that is connected to this AP via the edge user.

Returns: the AP linked with this AP, or null;

Definition at line 995 of file AttachmentPoint.java.

References denoptim.graph.Edge.getSrcAP(), denoptim.graph.Edge.getTrgAP(), and denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.graph.Vertex.getCappedAPs(), denoptim.graph.Vertex.getEdgeWith(), denoptim.graph.Template.removeProjectionOfInnerAP(), denoptim.graph.DGraph.removeSingleVertexAndWeld(), denoptim.graph.DGraph.replaceSingleSubGraph(), and denoptim.graph.AttachmentPointTest.testGetLinkedAP().

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◆ getLinkedAPThroughout()

AttachmentPoint denoptim.graph.AttachmentPoint.getLinkedAPThroughout ( )

Gets the attachment point (AP) that is connected to this AP via the edge user or in any edge user that might be external to the template embedding the graph where this AP is directly reachable.

Note that the AP that is used in the edge might not be the deepest image of that AP, i.e., the AP returned by this method might be a projection of a more deeply embedded AP, which you can get by using the AttachmentPoint#getEmbeddedAP() method.

Returns: the AP linked with this AP, or null;

Definition at line 1022 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getEdgeUserThroughout(), denoptim.graph.AttachmentPoint.getEmbeddedAP(), denoptim.graph.Edge.getSrcAP(), denoptim.graph.Edge.getSrcAPThroughout(), denoptim.graph.Edge.getTrgAP(), denoptim.graph.Edge.getTrgAPThroughout(), and denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.graph.DGraph.areApsUsedBySymmetricUsers(), denoptim.fragspace.APMapFinder.findMappingCompatibileAPs(), denoptim.graph.DGraph.findSymmetrySetsOfChildVertexes(), denoptim.graph.Vertex.getCappedAPsThroughout(), denoptim.graph.AttachmentPoint.hasConnectedSrcAtom(), and denoptim.graph.DGraph.removeSingleVertexAndWeld().

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◆ getOwner()

Vertex denoptim.graph.AttachmentPoint.getOwner ( )

Definition at line 900 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.owner.

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◆ getProperties()

Map< Object, Object > denoptim.graph.AttachmentPoint.getProperties ( )

Definition at line 1184 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.properties.

◆ getProperty()

Object denoptim.graph.AttachmentPoint.getProperty ( Object description )

Definition at line 1191 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.properties.

◆ getSingleAPStringSDF() [1/2]

String denoptim.graph.AttachmentPoint.getSingleAPStringSDF ( boolean isFirst )

Prepare a string for writing this AP in a fragment SDF file.

Only DENOPTIM's format is currently supported and we assume three coordinates are used to define the direction vector.

Parameters

isFirst set true is this is the first AP among those on the same source atom. When you give false the atom ID and the first separator are omitted.

Returns: a string with APClass and coordinated of the AP direction vector

Definition at line 829 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getSingleAPStringSDF().

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◆ getSingleAPStringSDF() [2/2]

String denoptim.graph.AttachmentPoint.getSingleAPStringSDF	(	boolean	isFirst,
		int	srcAtmID
	)

Prepare a string for writing this AP in a fragment SDF file.

Only DENOPTIM's format is currently supported and we assume three coordinates are used to define the direction vector.

Parameters

isFirst	use `true` if this is the first AP among those on the same source atom. When you give `false` the atom ID and the first separator are omitted.
srcAtmID	the index to use to identify the source atom. Use this to write something different from what reported in {@Link DENOPTIMAttachmentPoint::atomPositionNumber}, or use negative value to ignore this argument.

Returns: a string with APClass and coordinated of the AP direction vector

Definition at line 789 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.AttachmentPoint.atomPositionNumber, denoptim.graph.AttachmentPoint.dirVec, denoptim.utils.GeneralUtils.getEnglishFormattedDecimal(), denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPAAP, denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPSCL, denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPXYZ, and denoptim.graph.APClass.toSDFString().

Referenced by denoptim.graph.AttachmentPoint.getAPDefinitionsForSDF(), denoptim.graph.AttachmentPoint.getSingleAPStringSDF(), denoptim.graph.AttachmentPointTest.testConstructorsAndSDFString(), and denoptim.graph.AttachmentPointTest.testConstructorsAndSDFStringNoDirVec().

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◆ hasConnectedSrcAtom()

boolean denoptim.graph.AttachmentPoint.hasConnectedSrcAtom ( AttachmentPoint other )

Checks if this and another APs are rooted on atoms that are bonded in any way other than a possible connection resulting by an edge made in between this and the other AP.

Parameters

other the other aP to consider.

Returns: true is the two APs are rooted on atoms that participate in a bond either within a molecular fragment or across a graph edge.

Definition at line 1128 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getEmbeddedAP(), denoptim.graph.AttachmentPoint.getLinkedAPThroughout(), and denoptim.graph.AttachmentPoint.getOwner().

Referenced by denoptim.graph.DGraph.removeVertexAndWeld(), and denoptim.graph.AttachmentPointTest.testHasConnectedSrcAtom().

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◆ hasSameSrcAtom()

boolean denoptim.graph.AttachmentPoint.hasSameSrcAtom ( AttachmentPoint other )

Definition at line 1093 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getEmbeddedAP(), and denoptim.graph.AttachmentPoint.getOwner().

Referenced by denoptim.graph.DGraph.removeVertexAndWeld(), and denoptim.graph.AttachmentPointTest.testHasSameSrcAtom().

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◆ isAvailable()

boolean denoptim.graph.AttachmentPoint.isAvailable ( )

Check availability of this attachment point.

Does not account for embedding of the vertex in a template, i.e., this AP can be available in the graph owning the vertex this AP belongs to, but if the graph is itself the inner graph of a template, the AP might be projected on the template's surface and used to make an edge at that level. To account for such possibility use AttachmentPoint#isAvailableThroughout()

Returns: true if the attachment point has no user.

Definition at line 497 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.fragspace.FragmentSpace.classifyFragment(), denoptim.ga.GraphOperations.extendGraph(), denoptim.fragspace.FragsCombinationIterator.next(), denoptim.graph.Template.removeProjectionOfInnerAP(), and denoptim.graph.DGraph.replaceSingleSubGraph().

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◆ isAvailableThroughout()

boolean denoptim.graph.AttachmentPoint.isAvailableThroughout ( )

Check availability of this attachment point throughout the graph level, i.e., check also across the inner graph template boundary.

This method does account for embedding of the vertex in a template, i.e., this AP can be available in the graph owning the vertex this AP belongs to, but if the graph is itself the inner graph of a template, the AP is then projected on the template's surface and used to make an edge that uses the template as a single vertex. To ignore this possibility and consider only edges that belong to the graph owning the AP's vertex, use AttachmentPoint#isAvailable().

Returns: true if the attachment point has no user.

Definition at line 518 of file AttachmentPoint.java.

References denoptim.graph.Vertex.getGraphOwner(), denoptim.graph.Template.getOuterAPFromInnerAP(), denoptim.graph.AttachmentPoint.isAvailableThroughout(), denoptim.graph.AttachmentPoint.owner, denoptim.graph.DGraph.templateJacket, and denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.fragspace.APMapFinder.findMappingCompatibileAPs(), and denoptim.graph.AttachmentPoint.isAvailableThroughout().

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◆ isClassEnabled()

boolean denoptim.graph.AttachmentPoint.isClassEnabled ( )

Checks if this attachment point respects the APClass-based approach.

Returns: true if an APClass is defined.

Definition at line 552 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass.

◆ isSrcInUser()

boolean denoptim.graph.AttachmentPoint.isSrcInUser ( )

Checks the role of this AP in the user.

Returns: true if a user exists and this AP is the src AP in that edge. Otherwise, this method returns false without discriminating if this AP is free, i.e., the user is null, or this AP is the trg in the edge user.

Definition at line 1071 of file AttachmentPoint.java.

References denoptim.graph.Edge.getSrcAP(), and denoptim.graph.AttachmentPoint.user.

Referenced by denoptim.graph.AttachmentPointTest.testIsSrcInUser().

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◆ isSrcInUserThroughout()

boolean denoptim.graph.AttachmentPoint.isSrcInUserThroughout ( )

Checks the role of this AP in the user or in any user that might be external to the template embedding the graph where this AP is directly reachable.

Returns: true if a user exists and this AP is the src AP in that edge. Otherwise, this method returns false without discriminating if this AP is free, i.e., the user is null, or this AP is the trg in the edge user.

Definition at line 1052 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getEdgeUserThroughout(), denoptim.graph.Edge.getSrcAP(), denoptim.graph.Edge.getSrcAPThroughout(), and denoptim.graph.AttachmentPoint.user.

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◆ processSdfString()

static Object[] denoptim.graph.AttachmentPoint.processSdfString ( String str ) throws DENOPTIMException

static

Parses the string format used to record one attachment point in SDF files.

Parameters

str	the string to parse

Returns

the array of attachment point features in this order

atomPositionNumber
APClass
vector

Exceptions

DENOPTIMException

Definition at line 222 of file AttachmentPoint.java.

References denoptim.graph.APClass.make(), denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPAAP, denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPSCL, and denoptim.constants.DENOPTIMConstants.SEPARATORAPPROPXYZ.

Referenced by denoptim.graph.AttachmentPoint.AttachmentPoint(), and denoptim.graph.AttachmentPointTest.testParsingofSdfAPString().

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◆ sameAs() [1/2]

boolean denoptim.graph.AttachmentPoint.sameAs ( AttachmentPoint other )

Compares the features of this and another attachment point and decides if the two are same.

Does not check hashcodes, so this is not an equals method.

Parameters

other AP to compare with this AP.

Returns: true is the two APs have the same features.

Definition at line 664 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.sameAs().

Referenced by denoptim.graph.DGraph.areApsUsedBySymmetricUsers(), denoptim.graph.AttachmentPoint.comparePropertiesTo(), denoptim.graph.AttachmentPoint.sameAs(), denoptim.graph.Vertex.sameVertexFeatures(), denoptim.graph.AttachmentPointTest.testSameAs(), denoptim.graph.AttachmentPointTest.testSameAs_DiffAPClass(), and denoptim.graph.AttachmentPointTest.testSameAs_DiffSrcAtm().

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◆ sameAs() [2/2]

boolean denoptim.graph.AttachmentPoint.sameAs	(	AttachmentPoint	other,
		StringBuilder	reason
	)

Compares the features of this and another attachment point and decides if the two are same.

Does not check hashcodes, so this is not an equals method.

Parameters

other	AP to compare with this AP.
reason	string builder used to build the message clarifying the reason for returning `false`.

Returns: true if the two APs have the same features.

Definition at line 680 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.getAPClass(), denoptim.graph.AttachmentPoint.getAtomPositionNumber(), and denoptim.graph.AttachmentPoint.getIndexInOwner().

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◆ setAPClass() [1/2]

void denoptim.graph.AttachmentPoint.setAPClass ( APClass apClass )

Set the Attachment Point class.

Parameters

apClass the new APClass.

Definition at line 436 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass.

◆ setAPClass() [2/2]

void denoptim.graph.AttachmentPoint.setAPClass ( String apClass ) throws DENOPTIMException

Set the Attachment Point class.

The APClass is the combination of a main class (or "rule") and a subclass (or direction).

Parameters

apClass the new APClass.

Definition at line 424 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, and denoptim.graph.APClass.make().

Referenced by denoptim.utils.GraphConversionTool.getGraphFromString(), denoptim.graph.TemplateTest.testSameAPClass(), denoptim.graph.AttachmentPointTest.testSameAs_DiffAPClass(), and denoptim.graph.Template.updateInnerApID().

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◆ setAtomPositionNumber()

void denoptim.graph.AttachmentPoint.setAtomPositionNumber ( int atomPositionNumber )

Set the index of the source atom in the list of atoms of the fragment.

The index should reflect 0-based enumeration.

Parameters

atomPositionNumber the index

Definition at line 349 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.atomPositionNumber.

Referenced by denoptim.graph.Template.clone(), denoptim.graph.Fragment.removeAtoms(), and denoptim.graph.Fragment.updateAPs().

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◆ setAtomPositionNumberInMol()

void denoptim.graph.AttachmentPoint.setAtomPositionNumberInMol ( int atomPositionNumberInMol )

Set the index of the source atom in the list of atoms of the entire molecule.

The index should reflect 0-based enumeration.

Parameters

atomPositionNumberInMol the index

Definition at line 377 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.atomPositionNumberInMol.

◆ setCutId()

void denoptim.graph.AttachmentPoint.setCutId ( int id )

Parameters

id	the identifier of the cut operation that generated this AP.

Definition at line 479 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.id.

Referenced by denoptim.graph.EmptyVertex.clone(), denoptim.graph.Fragment.clone(), and denoptim.fragmenter.FragmenterTools.fragmentation().

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◆ setDirectionVector()

void denoptim.graph.AttachmentPoint.setDirectionVector ( Point3d dirVec )

Sets the end of the 3D vector defining the direction of the AP in 3D.

Note that the source of this vector is the source atom, and that the entries of dirVec are referred to the same origin as the coordinates of the source atom.

Parameters

dirVec the coordinates of the 3D point defining the end of the direction vector.

Definition at line 408 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.dirVec.

Referenced by denoptim.graph.Template.clone(), denoptim.fragmenter.ClusterableFragment.getTransformedCopy(), denoptim.graph.Template.setIAtomContainer(), and denoptim.graph.AttachmentPointTest.testClone().

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◆ setID()

void denoptim.graph.AttachmentPoint.setID ( int id )

Sets the unique integer that is used to sort list of attachment points.

WARNING: we do not check for uniqueness of the given value.

Definition at line 323 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.id.

Referenced by denoptim.graph.EmptyVertex.clone(), and denoptim.graph.Fragment.clone().

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◆ setOwner()

void denoptim.graph.AttachmentPoint.setOwner ( Vertex owner )

Sets the reference to the vertex that owns this attachment point.

This method should be used with caution as it has the capability of altering graphs!

Parameters

owner the vertex that own this attachment point.

Definition at line 894 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.owner.

Referenced by denoptim.graph.Template.addInnerToOuterAPMapping(), denoptim.graph.rings.PathSubGraph.findPath(), and denoptim.graph.Template.updateInnerToOuter().

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◆ setProperty()

void denoptim.graph.AttachmentPoint.setProperty	(	Object	key,
		Object	property
	)

Definition at line 1203 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.properties.

Referenced by denoptim.graph.AttachmentPoint.clone(), and denoptim.utils.MoleculeUtils.extractIACForSubgraph().

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◆ setUser()

void denoptim.graph.AttachmentPoint.setUser ( Edge edge )

Sets the reference to the edge that is using this attachment point.

Parameters

edge the user

Definition at line 910 of file AttachmentPoint.java.

Referenced by denoptim.graph.Edge.Edge(), and denoptim.graph.DGraph.removeEdge().

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◆ toString()

String denoptim.graph.AttachmentPoint.toString ( )

Produces a string with the information included in this object.

Returns: the string

Definition at line 867 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.AttachmentPoint.atomPositionNumber, and denoptim.graph.AttachmentPoint.dirVec.

Referenced by denoptim.gui.GraphViewerPanel.renumberAPs().

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◆ toStringNoId()

String denoptim.graph.AttachmentPoint.toStringNoId ( )

Produces a string with the information included in this object.

Returns: the string

Definition at line 841 of file AttachmentPoint.java.

References denoptim.graph.AttachmentPoint.apClass, denoptim.graph.AttachmentPoint.atomPositionNumber, and denoptim.graph.AttachmentPoint.dirVec.

Referenced by denoptim.graph.AttachmentPointTest.testConstructorsAndSDFStringNoDirVec().

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Member Data Documentation

◆ apClass

APClass denoptim.graph.AttachmentPoint.apClass

private

The attachment point class.

Definition at line 73 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.AttachmentPoint(), denoptim.graph.AttachmentPoint.clone(), denoptim.graph.AttachmentPoint.comparePropertiesTo(), denoptim.graph.AttachmentPoint.getAPClass(), denoptim.graph.AttachmentPoint.getBondType(), denoptim.graph.AttachmentPoint.getSingleAPStringSDF(), denoptim.graph.AttachmentPoint.isClassEnabled(), denoptim.graph.AttachmentPoint.setAPClass(), denoptim.graph.AttachmentPoint.toString(), and denoptim.graph.AttachmentPoint.toStringNoId().

◆ atomPositionNumber

int denoptim.graph.AttachmentPoint.atomPositionNumber = -1

private

The index of the source atom in the atom list of the fragment (0-based)

Definition at line 62 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.AttachmentPoint(), denoptim.graph.AttachmentPoint.clone(), denoptim.graph.AttachmentPoint.getAtomPositionNumber(), denoptim.graph.AttachmentPoint.getSingleAPStringSDF(), denoptim.graph.AttachmentPoint.setAtomPositionNumber(), denoptim.graph.AttachmentPoint.toString(), and denoptim.graph.AttachmentPoint.toStringNoId().

◆ atomPositionNumberInMol

int denoptim.graph.AttachmentPoint.atomPositionNumberInMol = -1

private

The index of the source atom in the atom list of the entire molecule (0-based)

Definition at line 68 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.getAtomPositionNumberInMol(), and denoptim.graph.AttachmentPoint.setAtomPositionNumberInMol().

◆ cutId

int denoptim.graph.AttachmentPoint.cutId

private

Identifier of the cut operation that generated this AP.

Definition at line 93 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.getCutId().

◆ dirVec

Point3d denoptim.graph.AttachmentPoint.dirVec

private

The direction vector representing the bond direction.

Definition at line 78 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.AttachmentPoint(), denoptim.graph.AttachmentPoint.clone(), denoptim.graph.AttachmentPoint.getDirectionVector(), denoptim.graph.AttachmentPoint.getSingleAPStringSDF(), denoptim.graph.AttachmentPoint.setDirectionVector(), denoptim.graph.AttachmentPoint.toString(), and denoptim.graph.AttachmentPoint.toStringNoId().

◆ id

int denoptim.graph.AttachmentPoint.id

private

Index used to keep the order in a list of attachment points.

Definition at line 57 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.getID(), denoptim.graph.AttachmentPoint.setCutId(), and denoptim.graph.AttachmentPoint.setID().

◆ owner

Vertex denoptim.graph.AttachmentPoint.owner

private

The vertex to which this AP is attached to.

Definition at line 83 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.AttachmentPoint(), denoptim.graph.AttachmentPoint.getAtomPositionNumber(), denoptim.graph.AttachmentPoint.getAtomPositionNumberInMol(), denoptim.graph.AttachmentPoint.getEdgeUserThroughout(), denoptim.graph.AttachmentPoint.getEmbeddedAP(), denoptim.graph.AttachmentPoint.getIndexInOwner(), denoptim.graph.AttachmentPoint.getOwner(), denoptim.graph.AttachmentPoint.isAvailableThroughout(), and denoptim.graph.AttachmentPoint.setOwner().

◆ properties

Map<Object, Object> denoptim.graph.AttachmentPoint.properties

private

Map of customisable properties.

Definition at line 98 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.clone(), denoptim.graph.AttachmentPoint.getProperties(), denoptim.graph.AttachmentPoint.getProperty(), and denoptim.graph.AttachmentPoint.setProperty().

◆ user

Edge denoptim.graph.AttachmentPoint.user

private

The edge that is using this AP, if any.

Definition at line 88 of file AttachmentPoint.java.

Referenced by denoptim.graph.AttachmentPoint.getEdgeUser(), denoptim.graph.AttachmentPoint.getEdgeUserThroughout(), denoptim.graph.AttachmentPoint.getLinkedAP(), denoptim.graph.AttachmentPoint.getLinkedAPThroughout(), denoptim.graph.AttachmentPoint.isAvailable(), denoptim.graph.AttachmentPoint.isAvailableThroughout(), denoptim.graph.AttachmentPoint.isSrcInUser(), and denoptim.graph.AttachmentPoint.isSrcInUserThroughout().

The documentation for this class was generated from the following file:

/github/workspace/src/main/java/denoptim/graph/AttachmentPoint.java

Public Member Functions

Static Public Member Functions

Private Member Functions

Private Attributes

Detailed Description

Constructor & Destructor Documentation

◆ AttachmentPoint() [1/6]

◆ AttachmentPoint() [2/6]

◆ AttachmentPoint() [3/6]

◆ AttachmentPoint() [4/6]

◆ AttachmentPoint() [5/6]

◆ AttachmentPoint() [6/6]

Member Function Documentation

◆ clone()

◆ comparePropertiesTo()

◆ compareTo()

◆ getAPClass()

◆ getAPDefinitionsForSDF()

◆ getAtomPositionNumber()

◆ getAtomPositionNumberInMol()

◆ getBondType()

◆ getCutId()

◆ getDirectionVector()

◆ getEdgeUser()

◆ getEdgeUserThroughout()

◆ getEmbeddedAP()

◆ getID()

◆ getIndexInOwner()

◆ getLinkedAP()

◆ getLinkedAPThroughout()

◆ getOwner()

◆ getProperties()

◆ getProperty()

◆ getSingleAPStringSDF() [1/2]

◆ getSingleAPStringSDF() [2/2]

◆ hasConnectedSrcAtom()

◆ hasSameSrcAtom()

◆ isAvailable()

◆ isAvailableThroughout()

◆ isClassEnabled()

◆ isSrcInUser()

◆ isSrcInUserThroughout()

◆ processSdfString()

◆ sameAs() [1/2]

◆ sameAs() [2/2]

◆ setAPClass() [1/2]

◆ setAPClass() [2/2]

◆ setAtomPositionNumber()

◆ setAtomPositionNumberInMol()

◆ setCutId()

◆ setDirectionVector()

◆ setID()

◆ setOwner()

◆ setProperty()

◆ setUser()

◆ toString()

◆ toStringNoId()

Member Data Documentation

◆ apClass

◆ atomPositionNumber

◆ atomPositionNumberInMol

◆ cutId

◆ dirVec

◆ id

◆ owner

◆ properties

◆ user