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DENOPTIM
Public Member Functions | Static Public Attributes | Private Member Functions | Private Attributes | Static Private Attributes | List of all members
denoptim.gui.GUIInspectFSERun Class Reference

A panel that allows to inspect the output of an combinatorial experiment exploring a fragment space. More...

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Public Member Functions

 GUIInspectFSERun (GUIMainPanel mainPanel)
 Constructor. More...
 
void importFSERunData (File folder)
 
- Public Member Functions inherited from denoptim.gui.GUICardPanel
 GUICardPanel (GUIMainPanel mainPanel, String newPanelName)
 Constructor for JPanel meant to be a single "card" in the deck of cards. More...
 
boolean hasUnsavedChanges ()
 Check for unsaved changes in the components included in this card. More...
 

Static Public Attributes

static AtomicInteger fseInspectorTabUID = new AtomicInteger(1)
 Unique identified for instances of this handler. More...
 

Private Member Functions

void initialize ()
 Initialize the panel and add buttons. More...
 
void resetView ()
 
void resetViewInPlotByLevel ()
 
void resetViewInPlotOfSortedList ()
 
CandidateLW choseAmongPossiblyOverlapping (JComponent parent, List< CandidateLW > overlappingItems)
 
void renderViewWithSelectedItem (CandidateLW item)
 
void renderViewWithoutSelectedItems ()
 

Private Attributes

JPanel ctrlPanel
 
JPanel ctrlPanelLeft
 
JPanel ctrlPanelRight
 
JSplitPane centralPanel
 
JPanel rightPanel
 
MoleculeViewPanel molViewer
 
JPanel chartHolderPanel
 
JComboBox< String > cmbPlotType
 
ArrayList< CandidateLW > allItems
 
int itemsWithFitness = 0
 
int minLevel = 1
 
int maxLevel = -1
 
JLabel lblTotItems
 
Map< Integer, CandidateLW > mapItemsInByLevel
 
ArrayList< CandidateLW > sorted
 
DefaultXYDataset datasetAllFit
 
DefaultXYDataset datasetSorted
 
DefaultXYDataset datasetSelectedLev = new DefaultXYDataset()
 
DefaultXYDataset datasetSelectedOrd = new DefaultXYDataset()
 
JFreeChart chartByLevel
 
JFreeChart chartBySorted
 
ChartPanel chartPanelByLevel
 
ChartPanel chartPanelSorted
 
JButton openGraph
 Button offering the possibility to load the graph inspector for a selected item. More...
 
String pathToSelectedItem
 Storage of pathname to the item selected in the chart. More...
 

Static Private Attributes

static final long serialVersionUID = 2245706077350445364L
 Version UID. More...
 

Additional Inherited Members

- Protected Attributes inherited from denoptim.gui.GUICardPanel
GUIMainPanel mainPanel
 The main panel (cards deck) More...
 

Detailed Description

A panel that allows to inspect the output of an combinatorial experiment exploring a fragment space.

Author
Marco Foscato

Definition at line 91 of file GUIInspectFSERun.java.

Constructor & Destructor Documentation

◆ GUIInspectFSERun()

denoptim.gui.GUIInspectFSERun.GUIInspectFSERun ( GUIMainPanel  mainPanel)

Constructor.

Definition at line 156 of file GUIInspectFSERun.java.

References denoptim.gui.GUIInspectFSERun.fseInspectorTabUID, denoptim.gui.GUIInspectFSERun.initialize(), and denoptim.gui.GUICardPanel.mainPanel.

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Member Function Documentation

◆ choseAmongPossiblyOverlapping()

CandidateLW denoptim.gui.GUIInspectFSERun.choseAmongPossiblyOverlapping ( JComponent  parent,
List< CandidateLW >  overlappingItems 
)
private

Definition at line 758 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

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◆ importFSERunData()

void denoptim.gui.GUIInspectFSERun.importFSERunData ( File  folder)

Definition at line 338 of file GUIInspectFSERun.java.

References denoptim.gui.GUIInspectFSERun.allItems, denoptim.gui.GUIInspectFSERun.chartByLevel, denoptim.gui.GUIInspectFSERun.chartBySorted, denoptim.gui.GUIInspectFSERun.chartHolderPanel, denoptim.gui.GUIInspectFSERun.chartPanelByLevel, denoptim.gui.GUIInspectFSERun.chartPanelSorted, denoptim.gui.GUIPreferences.chartPointSize, denoptim.gui.GUIInspectFSERun.choseAmongPossiblyOverlapping(), denoptim.gui.GUIInspectFSERun.datasetAllFit, denoptim.gui.GUIInspectFSERun.datasetSorted, denoptim.constants.DENOPTIMConstants.FITFILENAMEEXTOUT, denoptim.constants.DENOPTIMConstants.FITFILENAMEPREFIX, denoptim.graph.CandidateLW.getFitness(), denoptim.graph.CandidateLW.getLevel(), denoptim.graph.CandidateLW.hasFitness(), denoptim.gui.GUIInspectFSERun.itemsWithFitness, denoptim.gui.GUIInspectFSERun.lblTotItems, denoptim.gui.GUICardPanel.mainPanel, denoptim.gui.GUIInspectFSERun.mapItemsInByLevel, denoptim.gui.GUIInspectFSERun.maxLevel, denoptim.gui.GUIInspectFSERun.minLevel, denoptim.io.DenoptimIO.readLightWeightCandidate(), denoptim.gui.GUIInspectFSERun.renderViewWithoutSelectedItems(), denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem(), denoptim.gui.GUIInspectFSERun.resetViewInPlotByLevel(), denoptim.gui.GUIInspectFSERun.resetViewInPlotOfSortedList(), denoptim.gui.GUIInspectFSERun.rightPanel, and denoptim.gui.GUIInspectFSERun.sorted.

Referenced by denoptim.gui.HomePanel.initialize(), and denoptim.gui.MainToolBar.openFile().

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◆ initialize()

void denoptim.gui.GUIInspectFSERun.initialize ( )
private

Initialize the panel and add buttons.

Definition at line 169 of file GUIInspectFSERun.java.

References denoptim.gui.ButtonsBar.add(), denoptim.gui.GUIMainPanel.add(), denoptim.gui.GUIInspectFSERun.centralPanel, denoptim.gui.GUIInspectFSERun.chartHolderPanel, denoptim.gui.GUIInspectFSERun.cmbPlotType, denoptim.gui.GUIInspectFSERun.ctrlPanel, denoptim.gui.GUIInspectFSERun.ctrlPanelLeft, denoptim.gui.GUIInspectFSERun.ctrlPanelRight, denoptim.gui.GUIGraphHandler.importGraphsFromFile(), denoptim.gui.GUIInspectFSERun.lblTotItems, denoptim.gui.GUICardPanel.mainPanel, denoptim.gui.GUIInspectFSERun.molViewer, denoptim.gui.GUIInspectFSERun.openGraph, denoptim.gui.GUIInspectFSERun.pathToSelectedItem, denoptim.gui.GUIInspectFSERun.resetView(), and denoptim.gui.GUIInspectFSERun.rightPanel.

Referenced by denoptim.gui.GUIInspectFSERun.GUIInspectFSERun().

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◆ renderViewWithoutSelectedItems()

void denoptim.gui.GUIInspectFSERun.renderViewWithoutSelectedItems ( )
private

Definition at line 823 of file GUIInspectFSERun.java.

References denoptim.gui.MoleculeViewPanel.clearAll(), denoptim.gui.GUIInspectFSERun.datasetSelectedLev, denoptim.gui.GUIInspectFSERun.datasetSelectedOrd, denoptim.gui.GUIInspectFSERun.molViewer, and denoptim.gui.GUIInspectFSERun.openGraph.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

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◆ renderViewWithSelectedItem()

void denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem ( CandidateLW  item)
private

Definition at line 795 of file GUIInspectFSERun.java.

References denoptim.gui.GUIInspectFSERun.chartByLevel, denoptim.gui.GUIInspectFSERun.chartBySorted, denoptim.gui.GUIInspectFSERun.datasetSelectedLev, denoptim.gui.GUIInspectFSERun.datasetSelectedOrd, denoptim.graph.CandidateLW.getFitness(), denoptim.graph.CandidateLW.getLevel(), denoptim.graph.CandidateLW.getPathToFile(), denoptim.gui.MoleculeViewPanel.loadChemicalStructureFromFile(), denoptim.gui.GUIInspectFSERun.molViewer, denoptim.gui.GUIInspectFSERun.openGraph, denoptim.gui.GUIInspectFSERun.pathToSelectedItem, and denoptim.gui.GUIInspectFSERun.sorted.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

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◆ resetView()

void denoptim.gui.GUIInspectFSERun.resetView ( )
private

Definition at line 302 of file GUIInspectFSERun.java.

References denoptim.gui.GUIInspectFSERun.cmbPlotType, denoptim.gui.GUIInspectFSERun.resetViewInPlotByLevel(), and denoptim.gui.GUIInspectFSERun.resetViewInPlotOfSortedList().

Referenced by denoptim.gui.GUIInspectFSERun.initialize().

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◆ resetViewInPlotByLevel()

void denoptim.gui.GUIInspectFSERun.resetViewInPlotByLevel ( )
private

Definition at line 316 of file GUIInspectFSERun.java.

References denoptim.gui.GUIInspectFSERun.chartByLevel, denoptim.gui.GUIInspectFSERun.maxLevel, and denoptim.gui.GUIInspectFSERun.minLevel.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.resetView().

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◆ resetViewInPlotOfSortedList()

void denoptim.gui.GUIInspectFSERun.resetViewInPlotOfSortedList ( )
private

Definition at line 327 of file GUIInspectFSERun.java.

References denoptim.gui.GUIInspectFSERun.chartBySorted, and denoptim.gui.GUIInspectFSERun.itemsWithFitness.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.resetView().

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Member Data Documentation

◆ allItems

ArrayList<CandidateLW> denoptim.gui.GUIInspectFSERun.allItems
private

Definition at line 113 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

◆ centralPanel

JSplitPane denoptim.gui.GUIInspectFSERun.centralPanel
private

Definition at line 106 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize().

◆ chartByLevel

JFreeChart denoptim.gui.GUIInspectFSERun.chartByLevel
private

Definition at line 133 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem(), and denoptim.gui.GUIInspectFSERun.resetViewInPlotByLevel().

◆ chartBySorted

JFreeChart denoptim.gui.GUIInspectFSERun.chartBySorted
private

Definition at line 134 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem(), and denoptim.gui.GUIInspectFSERun.resetViewInPlotOfSortedList().

◆ chartHolderPanel

JPanel denoptim.gui.GUIInspectFSERun.chartHolderPanel
private

Definition at line 109 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.initialize().

◆ chartPanelByLevel

ChartPanel denoptim.gui.GUIInspectFSERun.chartPanelByLevel
private

Definition at line 135 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

◆ chartPanelSorted

ChartPanel denoptim.gui.GUIInspectFSERun.chartPanelSorted
private

Definition at line 136 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

◆ cmbPlotType

JComboBox<String> denoptim.gui.GUIInspectFSERun.cmbPlotType
private

Definition at line 111 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize(), and denoptim.gui.GUIInspectFSERun.resetView().

◆ ctrlPanel

JPanel denoptim.gui.GUIInspectFSERun.ctrlPanel
private

Definition at line 103 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize().

◆ ctrlPanelLeft

JPanel denoptim.gui.GUIInspectFSERun.ctrlPanelLeft
private

Definition at line 104 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize().

◆ ctrlPanelRight

JPanel denoptim.gui.GUIInspectFSERun.ctrlPanelRight
private

Definition at line 105 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize().

◆ datasetAllFit

DefaultXYDataset denoptim.gui.GUIInspectFSERun.datasetAllFit
private

Definition at line 128 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

◆ datasetSelectedLev

DefaultXYDataset denoptim.gui.GUIInspectFSERun.datasetSelectedLev = new DefaultXYDataset()
private

Definition at line 130 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.renderViewWithoutSelectedItems(), and denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem().

◆ datasetSelectedOrd

DefaultXYDataset denoptim.gui.GUIInspectFSERun.datasetSelectedOrd = new DefaultXYDataset()
private

Definition at line 131 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.renderViewWithoutSelectedItems(), and denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem().

◆ datasetSorted

DefaultXYDataset denoptim.gui.GUIInspectFSERun.datasetSorted
private

Definition at line 129 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

◆ fseInspectorTabUID

AtomicInteger denoptim.gui.GUIInspectFSERun.fseInspectorTabUID = new AtomicInteger(1)
static

Unique identified for instances of this handler.

Definition at line 101 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.GUIInspectFSERun().

◆ itemsWithFitness

int denoptim.gui.GUIInspectFSERun.itemsWithFitness = 0
private

Definition at line 114 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.resetViewInPlotOfSortedList().

◆ lblTotItems

JLabel denoptim.gui.GUIInspectFSERun.lblTotItems
private

Definition at line 117 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.initialize().

◆ mapItemsInByLevel

Map<Integer,CandidateLW> denoptim.gui.GUIInspectFSERun.mapItemsInByLevel
private

Definition at line 119 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData().

◆ maxLevel

int denoptim.gui.GUIInspectFSERun.maxLevel = -1
private

Definition at line 116 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.resetViewInPlotByLevel().

◆ minLevel

int denoptim.gui.GUIInspectFSERun.minLevel = 1
private

Definition at line 115 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.resetViewInPlotByLevel().

◆ molViewer

MoleculeViewPanel denoptim.gui.GUIInspectFSERun.molViewer
private

Definition at line 108 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize(), denoptim.gui.GUIInspectFSERun.renderViewWithoutSelectedItems(), and denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem().

◆ openGraph

JButton denoptim.gui.GUIInspectFSERun.openGraph
private

Button offering the possibility to load the graph inspector for a selected item.

Definition at line 142 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize(), denoptim.gui.GUIInspectFSERun.renderViewWithoutSelectedItems(), and denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem().

◆ pathToSelectedItem

String denoptim.gui.GUIInspectFSERun.pathToSelectedItem
private

Storage of pathname to the item selected in the chart.

This is used to enable loading the graph inspector at any time after selection of the item in the chart.

Definition at line 149 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.initialize(), and denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem().

◆ rightPanel

JPanel denoptim.gui.GUIInspectFSERun.rightPanel
private

Definition at line 107 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.initialize().

◆ serialVersionUID

final long denoptim.gui.GUIInspectFSERun.serialVersionUID = 2245706077350445364L
staticprivate

Version UID.

Definition at line 96 of file GUIInspectFSERun.java.

◆ sorted

ArrayList<CandidateLW> denoptim.gui.GUIInspectFSERun.sorted
private

Definition at line 120 of file GUIInspectFSERun.java.

Referenced by denoptim.gui.GUIInspectFSERun.importFSERunData(), and denoptim.gui.GUIInspectFSERun.renderViewWithSelectedItem().

The documentation for this class was generated from the following file: