$darkmode
DENOPTIM
Public Member Functions | Private Attributes | List of all members
denoptim.graph.VertexTest Class Reference

Unit test for DENOPTIMVertex. More...

Public Member Functions

void testFromToJSON_minimal () throws Exception
 
void testFromToJSON_withSymmetricAPs () throws Exception
 
void testSameAs_Equal ()
 
void testSameAs_DiffAPNum ()
 
void testClone () throws Exception
 
void testGetMutationSites () throws Exception
 
void testGetAPsWithAPClassStartingWith () throws Exception
 
void testIsConnectedToAromaticBridge () throws Exception
 

Private Attributes

StringBuilder reason = new StringBuilder()
 

Detailed Description

Unit test for DENOPTIMVertex.

Author
Marco Foscato

Definition at line 48 of file VertexTest.java.

Member Function Documentation

◆ testClone()

void denoptim.graph.VertexTest.testClone ( ) throws Exception

Definition at line 163 of file VertexTest.java.

References denoptim.graph.EmptyVertex.addAP(), denoptim.graph.Fragment.addAPOnAtom(), denoptim.graph.Fragment.addAtom(), denoptim.graph.Fragment.addBond(), denoptim.graph.EmptyVertex.clone(), denoptim.graph.Fragment.clone(), denoptim.graph.Vertex.getAllAPClasses(), denoptim.graph.EmptyVertex.getNumberOfAPs(), denoptim.graph.Vertex.getNumberOfAPs(), denoptim.graph.Vertex.getProperty(), denoptim.graph.EmptyVertex.getSymmetricAPSets(), denoptim.graph.Fragment.getSymmetricAPSets(), denoptim.graph.Vertex.getSymmetricAPSets(), denoptim.graph.Vertex.getVertexId(), denoptim.graph.Vertex.isRCV, denoptim.graph.APClass.make(), and denoptim.graph.Vertex.setProperty().

Here is the call graph for this function:

◆ testFromToJSON_minimal()

void denoptim.graph.VertexTest.testFromToJSON_minimal ( ) throws Exception

Definition at line 55 of file VertexTest.java.

References denoptim.graph.Vertex.VertexType.EmptyVertex, denoptim.graph.Vertex.BBType.FRAGMENT, denoptim.graph.Vertex.fromJson(), denoptim.graph.Vertex.VertexType.MolecularFragment, denoptim.graph.Vertex.VertexType.Template, denoptim.graph.EmptyVertex.toJson(), denoptim.graph.Fragment.toJson(), denoptim.graph.Template.toJson(), and denoptim.graph.Vertex.vertexType.

Here is the call graph for this function:

◆ testFromToJSON_withSymmetricAPs()

void denoptim.graph.VertexTest.testFromToJSON_withSymmetricAPs ( ) throws Exception

Definition at line 79 of file VertexTest.java.

References denoptim.graph.SymmetricSet< T >.add(), denoptim.graph.EmptyVertex.addAP(), denoptim.graph.EmptyVertex.addSymmetricAPSet(), denoptim.graph.Vertex.fromJson(), denoptim.graph.Vertex.getAP(), denoptim.graph.Vertex.getSymmetricAPSets(), denoptim.graph.APClass.make(), and denoptim.graph.EmptyVertex.toJson().

Here is the call graph for this function:

◆ testGetAPsWithAPClassStartingWith()

void denoptim.graph.VertexTest.testGetAPsWithAPClassStartingWith ( ) throws Exception

Definition at line 246 of file VertexTest.java.

References denoptim.graph.EmptyVertex.addAP(), denoptim.graph.Vertex.getAPsWithAPClassStartingWith(), and denoptim.graph.APClass.make().

Here is the call graph for this function:

◆ testGetMutationSites()

void denoptim.graph.VertexTest.testGetMutationSites ( ) throws Exception

Definition at line 217 of file VertexTest.java.

References denoptim.graph.Vertex.BBType.CAP, denoptim.utils.MutationType.EXTEND, denoptim.graph.Vertex.BBType.FRAGMENT, denoptim.graph.Vertex.getMutationSites(), denoptim.graph.Vertex.BBType.NONE, denoptim.graph.Vertex.BBType.SCAFFOLD, denoptim.graph.Vertex.setMutationTypes(), and denoptim.graph.Vertex.BBType.UNDEFINED.

Here is the call graph for this function:

◆ testIsConnectedToAromaticBridge()

void denoptim.graph.VertexTest.testIsConnectedToAromaticBridge ( ) throws Exception

Definition at line 267 of file VertexTest.java.

References denoptim.graph.EmptyVertex.addAP(), denoptim.graph.DGraph.addRing(), denoptim.graph.DGraph.addVertex(), denoptim.graph.APClass.APCAROMBRIDGE2EL, denoptim.graph.DGraph.appendVertexOnAP(), denoptim.graph.Vertex.getAP(), denoptim.fragspace.FragmentSpace.getPolarizedRCV(), denoptim.graph.Vertex.isAromaticBridge(), denoptim.graph.Vertex.isConnectedToAromaticBridge(), and denoptim.graph.APClass.make().

Here is the call graph for this function:

◆ testSameAs_DiffAPNum()

void denoptim.graph.VertexTest.testSameAs_DiffAPNum ( )

Definition at line 143 of file VertexTest.java.

References denoptim.graph.EmptyVertex.addAP(), denoptim.graph.VertexTest.reason, and denoptim.graph.EmptyVertex.sameAs().

Here is the call graph for this function:

◆ testSameAs_Equal()

void denoptim.graph.VertexTest.testSameAs_Equal ( )

Definition at line 110 of file VertexTest.java.

References denoptim.graph.EmptyVertex.addAP(), denoptim.graph.VertexTest.reason, denoptim.graph.EmptyVertex.sameAs(), denoptim.graph.Vertex.setProperty(), and denoptim.graph.Vertex.setUniquefyingProperty().

Here is the call graph for this function:

Member Data Documentation

◆ reason

StringBuilder denoptim.graph.VertexTest.reason = new StringBuilder()
private

Definition at line 50 of file VertexTest.java.

Referenced by denoptim.graph.VertexTest.testSameAs_DiffAPNum(), and denoptim.graph.VertexTest.testSameAs_Equal().

The documentation for this class was generated from the following file: