denoptim.molecularmodeling.zmatrix.ZMatrixBond Class Reference

Representation of a bond in the ZMatrix. More...

Collaboration diagram for denoptim.molecularmodeling.zmatrix.ZMatrixBond:

Public Member Functions
	ZMatrixBond (ZMatrixAtom atm1, ZMatrixAtom atm2)
	Constructor for ZMatrixBond. More...
ZMatrixAtom	getAtm1 ()
	Get the first atom in the bond. More...
ZMatrixAtom	getAtm2 ()
	Get the second atom in the bond. More...
void	setAtm1 (ZMatrixAtom atm1)
	Set the first atom in the bond. More...
void	setAtm2 (ZMatrixAtom atm2)
	Set the second atom in the bond. More...
boolean	equals (Object o)
int	hashCode ()
String	toString ()

Private Attributes
ZMatrixAtom	atm1
ZMatrixAtom	atm2

Detailed Description

Representation of a bond in the ZMatrix.

Definition at line 6 of file ZMatrixBond.java.

Constructor & Destructor Documentation

ZMatrixBond()

denoptim.molecularmodeling.zmatrix.ZMatrixBond.ZMatrixBond	(	ZMatrixAtom	atm1,
		ZMatrixAtom	atm2
	)

Constructor for ZMatrixBond.

Parameters

atm1	The first atom in the bond
atm2	The second atom in the bond

Definition at line 18 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1, and denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2.

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrixBond.equals().

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Member Function Documentation

equals()

boolean denoptim.molecularmodeling.zmatrix.ZMatrixBond.equals

(

Object

o

)

Definition at line 71 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1, denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2, denoptim.molecularmodeling.zmatrix.ZMatrixAtom.equals(), and denoptim.molecularmodeling.zmatrix.ZMatrixBond.ZMatrixBond().

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrixAtomTest.testZMatrixBondEquals().

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getAtm1()

ZMatrixAtom denoptim.molecularmodeling.zmatrix.ZMatrixBond.getAtm1

(

)

Get the first atom in the bond.

Returns

The first atom in the bond

Definition at line 30 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1.

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrix.equals(), and denoptim.molecularmodeling.zmatrix.ZMatrixTest.testClone().

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getAtm2()

ZMatrixAtom denoptim.molecularmodeling.zmatrix.ZMatrixBond.getAtm2

(

)

Get the second atom in the bond.

Returns

The second atom in the bond

Definition at line 41 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2.

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrix.equals(), denoptim.molecularmodeling.zmatrix.ZMatrixTest.testClone(), and denoptim.molecularmodeling.zmatrix.ZMatrixBondTest.testEquals().

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hashCode()

int denoptim.molecularmodeling.zmatrix.ZMatrixBond.hashCode

(

)

Definition at line 90 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1, denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2, and denoptim.molecularmodeling.zmatrix.ZMatrixAtom.getId().

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrixAtomTest.testZMatrixBondHashCode(), and denoptim.molecularmodeling.zmatrix.ZMatrixBondTest.testZMatrixBondHashCode().

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setAtm1()

void denoptim.molecularmodeling.zmatrix.ZMatrixBond.setAtm1

(

ZMatrixAtom

atm1

)

Set the first atom in the bond.

Parameters

atm1	The first atom in the bond to set

Definition at line 52 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1.

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrixBondTest.testEquals().

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setAtm2()

void denoptim.molecularmodeling.zmatrix.ZMatrixBond.setAtm2

(

ZMatrixAtom

atm2

)

Set the second atom in the bond.

Parameters

atm2	The second atom in the bond to set

Definition at line 63 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2.

toString()

String denoptim.molecularmodeling.zmatrix.ZMatrixBond.toString

(

)

Definition at line 104 of file ZMatrixBond.java.

References denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1, denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2, and denoptim.molecularmodeling.zmatrix.ZMatrixAtom.getId().

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Member Data Documentation

atm1

ZMatrixAtom denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm1

private

Definition at line 8 of file ZMatrixBond.java.

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrixBond.equals(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.getAtm1(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.hashCode(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.setAtm1(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.toString(), and denoptim.molecularmodeling.zmatrix.ZMatrixBond.ZMatrixBond().

atm2

ZMatrixAtom denoptim.molecularmodeling.zmatrix.ZMatrixBond.atm2

private

Definition at line 9 of file ZMatrixBond.java.

Referenced by denoptim.molecularmodeling.zmatrix.ZMatrixBond.equals(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.getAtm2(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.hashCode(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.setAtm2(), denoptim.molecularmodeling.zmatrix.ZMatrixBond.toString(), and denoptim.molecularmodeling.zmatrix.ZMatrixBond.ZMatrixBond().

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The documentation for this class was generated from the following file:

• /github/workspace/src/main/java/denoptim/molecularmodeling/zmatrix/ZMatrixBond.java