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DENOPTIM
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This is the complete list of members for denoptim.utils.DummyAtomHandler, including all inherited members.
| addDummiesOnLinearities(Fragment frag, double angLim) | denoptim.utils.DummyAtomHandler | static |
| DummyAtomHandler(String elm, Logger logger) | denoptim.utils.DummyAtomHandler | |
| elm | denoptim.utils.DummyAtomHandler | private |
| exploreConnectedToAtom(IAtom seed, List< IAtom > inList, IAtomContainer mol, List< Boolean > doneFlag) | denoptim.utils.DummyAtomHandler | private |
| getDummyInSafeDirection(IAtom atmA, Point3d pB, IAtomContainer mol, List< Point3d > placesToAvoid) | denoptim.utils.DummyAtomHandler | static |
| getFlagsVector(int size) | denoptim.utils.DummyAtomHandler | private |
| getSDFAtomNumber(IAtomContainer mol, IAtom atm) | denoptim.utils.DummyAtomHandler | privatestatic |
| logger | denoptim.utils.DummyAtomHandler | private |
| recNum | denoptim.utils.DummyAtomHandler | package |
| removeDummy(IAtomContainer mol) | denoptim.utils.DummyAtomHandler | |
| removeDummyInHapto(IAtomContainer mol) | denoptim.utils.DummyAtomHandler |