denoptim.molecularmodeling.RingClosureTool Member List

This is the complete list of members for denoptim.molecularmodeling.RingClosureTool, including all inherited members.

attemptAllRingClosures(ChemicalObjectModel mol)	denoptim.molecularmodeling.RingClosureTool
attemptRingClosure(ChemicalObjectModel chemObj, Set< ObjectPair > rcaCombination)	denoptim.molecularmodeling.RingClosureTool
closeRings(ChemicalObjectModel mol, Set< ObjectPair > rcaCombination)	denoptim.molecularmodeling.RingClosureTool
fsep	denoptim.molecularmodeling.RingClosureTool	package
itn	denoptim.molecularmodeling.RingClosureTool	private
logger	denoptim.molecularmodeling.RingClosureTool	private
RingClosureTool(MMBuilderParameters settings)	denoptim.molecularmodeling.RingClosureTool
saturateRingClosingAttractor(ChemicalObjectModel mol)	denoptim.molecularmodeling.RingClosureTool
settings	denoptim.molecularmodeling.RingClosureTool	private
setTinkerTypes(TinkerMolecule tmol)	denoptim.molecularmodeling.RingClosureTool	private