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DENOPTIM
denoptim.integration.tinker.TinkerAtom Member List

This is the complete list of members for denoptim.integration.tinker.TinkerAtom, including all inherited members.

atmNbdenoptim.integration.tinker.TinkerAtomprivate
atomStrdenoptim.integration.tinker.TinkerAtomprivate
distAnglesdenoptim.integration.tinker.TinkerAtomprivate
ffAtomTypedenoptim.integration.tinker.TinkerAtomprivate
getAtomNeighbours()denoptim.integration.tinker.TinkerAtom
getAtomString()denoptim.integration.tinker.TinkerAtom
getAtomType()denoptim.integration.tinker.TinkerAtom
getDistAngle()denoptim.integration.tinker.TinkerAtom
getVertexId()denoptim.integration.tinker.TinkerAtom
getXYZ()denoptim.integration.tinker.TinkerAtom
getXYZ(double[] x)denoptim.integration.tinker.TinkerAtom
getXYZIndex()denoptim.integration.tinker.TinkerAtom
moveTo(double[] d)denoptim.integration.tinker.TinkerAtom
moveTo(double a, double b, double c)denoptim.integration.tinker.TinkerAtom
setAtomNeighbours(int[] atmNb)denoptim.integration.tinker.TinkerAtom
setAtomString(String atomStr)denoptim.integration.tinker.TinkerAtom
setAtomType(int ffAtomType)denoptim.integration.tinker.TinkerAtom
setDistAngle(double[] distAngles)denoptim.integration.tinker.TinkerAtom
setVertexId(long vidx)denoptim.integration.tinker.TinkerAtom
setXYZ(double[] xyz)denoptim.integration.tinker.TinkerAtom
setXYZIndex(int xyzIndex)denoptim.integration.tinker.TinkerAtom
TinkerAtom()denoptim.integration.tinker.TinkerAtom
TinkerAtom(int xyzIndex, String atomStr, int ffAtomType, double[] xyz, int[] atmNb, double[] distAngles)denoptim.integration.tinker.TinkerAtom
toString()denoptim.integration.tinker.TinkerAtom
usesProperTorsion()denoptim.integration.tinker.TinkerAtom
vtxIddenoptim.integration.tinker.TinkerAtomprivate
xyzdenoptim.integration.tinker.TinkerAtomprivate
xyzIndexdenoptim.integration.tinker.TinkerAtomprivate