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DENOPTIM
denoptim.graph.rings.RingClosureFinder Member List

This is the complete list of members for denoptim.graph.rings.RingClosureFinder, including all inherited members.

evaluateClosability(List< IAtom > path, ArrayList< Boolean > rotatability, ArrayList< ArrayList< Point3d > > dihRefs, ArrayList< ArrayList< Double > > closableConfs, RingClosureParameters settings)denoptim.graph.rings.RingClosureFinderstatic
hasClosableRotamer(List< Point3d > chain, ArrayList< Boolean > rotatability, ArrayList< Double > dihedrals, ArrayList< Double > dihIncement, int activeRot, double step, int h1, int h2, int t1, int t2, ArrayList< Double > clsablConds, ArrayList< ArrayList< Double > > closableConfs, boolean doExhaustiveSearch, boolean writeAllConfs, Logger logger, int rec)denoptim.graph.rings.RingClosureFinderstatic
NLdenoptim.graph.rings.RingClosureFinderprivatestatic
reportForDebug(String filename, List< Point3d > chain)denoptim.graph.rings.RingClosureFinderprivatestatic