This is the complete list of members for denoptim.graph.rings.PathSubGraph, including all inherited members.

allPossibleChainIDs	denoptim.graph.rings.PathSubGraph	private
atmNumStr	denoptim.graph.rings.PathSubGraph	private
atomsPathVAVB	denoptim.graph.rings.PathSubGraph	private
bondsPathVAVB	denoptim.graph.rings.PathSubGraph	private
buildAdjacencyFromGraph(DGraph graph)	denoptim.graph.rings.PathSubGraph	privatestatic
chainID	denoptim.graph.rings.PathSubGraph	private
debug	denoptim.graph.rings.PathSubGraph	private
dihedralRefPts	denoptim.graph.rings.PathSubGraph	private
edgesPathVAVB	denoptim.graph.rings.PathSubGraph	private
findAtomPath(IAtomContainer iac)	denoptim.graph.rings.PathSubGraph	static
findPath(Vertex from, Vertex to)	denoptim.graph.rings.PathSubGraph	static
findPath(Vertex from, Vertex to, Set< Long > visited)	denoptim.graph.rings.PathSubGraph	privatestatic
findShortestPath(Vertex vA, Vertex vB, Map< Vertex, List< Vertex > > neighbours)	denoptim.graph.rings.PathSubGraph	privatestatic
getAllAlternativeChainIDs()	denoptim.graph.rings.PathSubGraph
getAtomPath()	denoptim.graph.rings.PathSubGraph
getAtomRefStr()	denoptim.graph.rings.PathSubGraph
getBondPath()	denoptim.graph.rings.PathSubGraph
getChainID()	denoptim.graph.rings.PathSubGraph
getDihedralRefPoints()	denoptim.graph.rings.PathSubGraph
getEdgesPath()	denoptim.graph.rings.PathSubGraph
getGraph()	denoptim.graph.rings.PathSubGraph
getHeadVertex()	denoptim.graph.rings.PathSubGraph
getMolecularRepresentation()	denoptim.graph.rings.PathSubGraph
getPathLength()	denoptim.graph.rings.PathSubGraph
getRCC()	denoptim.graph.rings.PathSubGraph
getTailVertex()	denoptim.graph.rings.PathSubGraph
getVertecesPath()	denoptim.graph.rings.PathSubGraph
getVertexIdInPath(IAtom a)	denoptim.graph.rings.PathSubGraph	private
graph	denoptim.graph.rings.PathSubGraph	private
hasMolecularRepresentation()	denoptim.graph.rings.PathSubGraph
hasMolRepr	denoptim.graph.rings.PathSubGraph	private
iacPathVAVB	denoptim.graph.rings.PathSubGraph	private
makeMolecularRepresentation(IAtomContainer mol, boolean make3D, Logger logger, Randomizer randomizer)	denoptim.graph.rings.PathSubGraph
PathSubGraph(Vertex vA, Vertex vB)	denoptim.graph.rings.PathSubGraph
PathSubGraph(Vertex vA, Vertex vB, Map< Vertex, List< Vertex > > adjacency)	denoptim.graph.rings.PathSubGraph
PathSubGraph(Vertex vA, Vertex vB, Map< Vertex, List< Vertex > > adjacency, boolean combineAdjacencyAndActualEdges)	denoptim.graph.rings.PathSubGraph
rcc	denoptim.graph.rings.PathSubGraph	private
reconstructVertexPath(Vertex vA, Vertex vB, Map< Vertex, Vertex > parent)	denoptim.graph.rings.PathSubGraph	privatestatic
revChainID	denoptim.graph.rings.PathSubGraph	private
setGraphAndChainIDs()	denoptim.graph.rings.PathSubGraph	private
setRCC(RingClosingConformations rcc)	denoptim.graph.rings.PathSubGraph
toString()	denoptim.graph.rings.PathSubGraph
vA	denoptim.graph.rings.PathSubGraph	private
vB	denoptim.graph.rings.PathSubGraph	private
vertPathVAVB	denoptim.graph.rings.PathSubGraph	private