$darkmode
|
DENOPTIM
|
This is the complete list of members for denoptim.graph.rings.CyclicGraphHandler, including all inherited members.
| checkChelatesGraph(DGraph molGraph, List< Ring > ringsSet) | denoptim.graph.rings.CyclicGraphHandler | |
| checkClosabilityOfInterdependentPaths(ArrayList< ObjectPair > lstPairs, Map< IBond, List< PathSubGraph > > interdepPaths, Map< ObjectPair, PathSubGraph > allGoodPaths) | denoptim.graph.rings.CyclicGraphHandler | private |
| combineCompatPathSubGraphs(int ii0, ArrayList< Vertex > sortedKeys, Map< Vertex, ArrayList< Vertex > > compatMap, ArrayList< ObjectPair > lstPairs, ArrayList< Long > usedId, Map< ObjectPair, PathSubGraph > allGoodPaths, Map< IBond, List< PathSubGraph > > interdepPaths, ArrayList< List< Ring > > allCombsOfRings) | denoptim.graph.rings.CyclicGraphHandler | private |
| CyclicGraphHandler(RingClosureParameters settings, FragmentSpace fragSpace) | denoptim.graph.rings.CyclicGraphHandler | |
| fragSpace | denoptim.graph.rings.CyclicGraphHandler | private |
| getPossibleCombinationOfRings(IAtomContainer mol, DGraph molGraph) | denoptim.graph.rings.CyclicGraphHandler | |
| getRandomCombinationOfRings(IAtomContainer inMol, DGraph molGraph, int maxRingClosures) | denoptim.graph.rings.CyclicGraphHandler | |
| hasInterdependentPaths(ArrayList< ObjectPair > lstPairs, Map< IBond, List< PathSubGraph > > interdepPaths) | denoptim.graph.rings.CyclicGraphHandler | private |
| logger | denoptim.graph.rings.CyclicGraphHandler | private |
| maxLng | denoptim.graph.rings.CyclicGraphHandler | private |
| NL | denoptim.graph.rings.CyclicGraphHandler | privatestatic |
| recCount | denoptim.graph.rings.CyclicGraphHandler | private |
| settings | denoptim.graph.rings.CyclicGraphHandler | private |